Gekko japonicus (Schlegel's Japanese gecko): 107121240
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Entry
107121240 CDS
T04299
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja02010
ABC transporters
gja04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107121240
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107121240
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gja02000
]
107121240
Transporters [BR:
gja02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
107121240
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC2_membrane_3
Glycogen_syn
ABC_tran
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
107121240
NCBI-ProteinID:
XP_015279613
LinkDB
All DBs
Position
Un
AA seq
1957 aa
AA seq
DB search
VSSMTSFVEFRAALQNLSGAGVASSPQGAFETVSRVVCGHPEGGDLKIPSLNWYEDNDIK
SFLSRNGSEQKSVSLDNATTPYCKDLIRSLESNPVSRILWQGIKPLFVGKILYTPPTPAT
QKVMAEVNRTFQNLAVLREVRGAWQDLGPQIYAFMNASLEVAAVQNLLETPGVAHFLEQR
LSGTFWNVSTLRDFLSADSGGRAYTWRDAYAEVDEVIDTLSRFIECVSLDKIEGVSSEEH
LISRAMQLLEDRQFWAGVVFLPPDNQSELGPDLPARVRFKIRMDIDDVTRTNKIKDRFWD
PGPAADPFEDLRYVWGGFVYVQDLVEQAVVRVLSGMPSLRRTGVYVQQMPYPCFVDDVFL
RVLNRSLPLFMTLAWIYSVAMIIKGVVHEKEARLKETMKIMGLKSATLWLSWFLSSFIPF
LISALLLVLILKVGDILPYSDPAVVFLFLATFAVATISQCFLISTFFSRANLASACGGII
YFSFYLPYVLCVAWRDHITFPLRLLVSLMSPVAFGFGCEYFSLYEEQGMGVQWHNLNSSP
VEGDRYTFATSVGLLLFDALLYGLATWYIEGVFPGQYGIPKPWNFPFQKSYWLGGSSSDG
SPHPVPTNSLNSAEALVEEPLAHLQVGVSIRNLVKIYHSSRKIAVSGLSLDFYEGQITSF
LGHNGAGKTTTMSILTGLLPPSSGTAYILGRDICSEMDVIRKTMGMCPQHNVLFDILTVE
EHIWFYGRLKGLSEQQVQEETDQIIQDVGLPHKRREQTKNLSGGMQRKLSVAIAFVGGSK
VVILDEPTAGVDPYSRRGIWELLLKYRAGRTILLSTHYMDEADLLGDRIAIISQGRLCCC
GSSLFLKTKLGTGYYLTLVKQEAGGARERVSAANGLVSTSKKDDDNSDRSSDTGLGSEQN
SESSAFDVPQLTTLIQKLVPGSRLVEDIGQEVLYVLPYSGAKEGAFGDLFQELDSRLGEL
GISSYGISDTSLEEIFLKVAEDTGVDAEGAAEAPKNFSTSTPASGYTLRTLSEDTETADA
EPAEEPTETDLLRGVGAQDSGHLTGWALTYQQLHALFTKRFLYARRSTRGFLAQIVLPAL
FVCIALLFSLIVPPFGKYPPLPLTPWMYGPQTTFFSEDSLGDADSARLLEALLEEPGFGT
KTQSCSHAWNFVNPEVPPSLVEVLRNGNWTLGDPSPGCECSSQVARKMLPDCPEAAGGLP
PPQMQTDTGDILQNLTGRNISDYLVKTYSRVIRKGLKTKKWVNEQRYGGFSLGARTMQAL
PTTQEVNATVKMIRGFLSITKGSSLDRLLGNLSSFVDGLESPENVKVWFNNKGWHAMVSF
VNLANNGLLRAGLPAGVDRSRYSITAINHPLNMTKEQLSEAALMATSVDVLVSICVMFAL
SFVPASFVLFLIEERVSNAKHLQIVSGMKPGVYWLGNFAWDMCNYLVPAVLVVLIFICFQ
QKSYVSPANLPTLILLLLLYGWSITPLMYPASFFFSVPSTAYVALTCINLFIGINGSVAT
FVLELFTDKKLNDVNVILKKVFLVFPHFCLGRGLIDMVKNQAMADAFERFGDKHFVSPLS
WDLAGKNIFAMAVEGFVFFIFTILVQYKFFIRLRVDIVMPPYRSLVYRMNKKPAVDRLCV
GIPPGEVGARTECTVMGIPSISTNLSGFGCFMEEHIADPTAYGIYIVDRRFRGLDESCTQ
LTSFLYSFCQQTRRQRIIQRNRTERLSDLLDWKYLGRVVQWGLSTLGLMQYADRPAGRYS
GGNKRKLSTAIALIGAPPVVFLDEPTTGMDPRAKRFLWNCILGVIKDGRSVVLTSHSMEE
CEALCTRMAILVNGRFRCLGSVQHLKNRFGDGYTIVLRVSGTDPDLGPLEKFIRDSFPSI
ILKEKHHCTLQYQLPSRGCSLAKIFGILSTHQGTYHIEDYSVSQTTLDQVFVHFAKDQSD
EEHPKEASSAANPTNPSSRWRRIAGFLDDKSVRESQV
NT seq
5874 nt
NT seq
+upstream
nt +downstream
nt
gtctcctccatgaccagctttgtggaattccgtgcggcactgcagaacctgtccggggct
ggcgttgcctcttcccctcaaggagcgtttgagacggtgtcccgggttgtgtgtggccac
ccggaagggggcgacttgaagatcccctccctcaactggtacgaggacaacgacatcaag
agcttcctcagccgcaacggatccgagcagaagtctgtctccttggacaatgctacgacc
ccctattgcaaagatcttatcaggagcctggaatccaacccggtctcccgcattttatgg
cagggcatcaaacccctgtttgtcggcaaaattctgtacacccctcctacgcctgccacg
cagaaggtcatggctgaggtgaaccggaccttccagaatctggctgtgctacgggaagtg
aggggagcctggcaggacctggggccccagatctacgccttcatgaatgccagcctcgaa
gttgccgccgttcagaaccttctggaaacccctggggtggcccatttcctggagcagcgc
ctgagtggaacgttctggaatgtgtcaaccttgagggacttcctgtcggcagactcagga
ggtcgggcctacacttggcgcgatgcctatgctgaagtggatgaggtcattgacaccttg
tcccggtttattgagtgtgtctcgttggacaagatcgagggggtgtcgtctgaagagcac
ctcatctcacgagccatgcagctgctggaggaccgtcagttctgggccggagttgtgttt
ctgccaccggataaccagagcgagcttggcccggacttgccagcccgtgtccgcttcaag
atccgcatggacatcgatgatgtcacgcgcaccaacaagatcaaggacaggttttgggac
ccgggaccggctgccgatccctttgaagacttgcgttacgtctggggtggctttgtctat
gtgcaggaccttgtggaacaggcggtggtgcgggttctctcggggatgccgtcgctgcgc
cgcacgggtgtctatgtgcagcagatgccttacccctgcttcgtggacgatgtcttccta
cgagtcttaaaccgctccctgcctctcttcatgacgctagcttggatctactccgtagcc
atgatcatcaaaggggtggtccacgagaaggaagcccgcctcaaagagaccatgaagatc
atggggctgaagagcgccaccctctggctcagctggttcctcagtagcttcatccctttc
ctcatcagcgccttgttgctcgtcctgattctcaaggtgggagacatcctgccctacagt
gaccccgccgtggtcttcctcttcctagccacttttgcggtggccaccatctcccagtgt
ttcctcatcagcacattcttctcccgtgccaacctcgcctcagcctgtggcggcatcatc
tacttctccttctacctgccttacgtgttgtgcgtggcttggcgcgaccacattaccttc
cctctgcggctcttggtgagcctcatgtcccccgtggcgttcggcttcggctgcgagtac
ttctccctctacgaggagcaagggatgggtgttcagtggcacaacctcaattccagcccc
gtggaaggagaccggtacacgttcgccacgtctgtggggctgcttctcttcgatgcgctg
ctctatggcctggccacgtggtacatagaaggcgtgtttccaggccaatatgggatccca
aagccttggaatttccccttccagaagagttactggcttggggggtcctccagcgatggc
tcccctcaccccgttcctacaaactctcttaactctgcagaagcgttggtggaggagcct
cttgcccacttacaggtgggcgtctcgatccgcaacctggtgaagatctaccacagcagc
cggaagatcgccgtcagcgggctgagcctggacttctacgagggccagatcacttccttc
ctggggcacaatggtgccggaaagaccaccaccatgtccatcctgaccggcctgctgccc
cccagttccggcaccgcctacatcctggggagggacatctgctcggaaatggacgtcatc
cggaagacgatggggatgtgccctcagcacaacgtcctcttcgacatcctgaccgtggaa
gaacacatttggttttatggacgtctgaagggcctctctgaacagcaggtccaggaggag
acggaccagataatacaggacgtggggctgccccacaagcgacgggaacagaccaagaac
ttatcaggtgggatgcaacggaagctctcagtagccattgcctttgtaggtggctccaag
gtggtgatactggacgagcccacagccggtgttgacccgtactctcgccgagggatctgg
gaactgctgttgaagtatcgtgcaggccgcaccatcctcctgtccacccactacatggac
gaggcggacctcctcggcgaccgcatcgccatcatctcccagggccgactctgctgctgc
ggttcctccctcttcctcaagacgaagctgggcacgggctactacctgaccctggtgaag
caagaggccggcggggctcgcgagagggtgagcgcggccaacggccttgtgtccaccagt
aaaaaggatgatgacaattcggacaggagcagtgatacgggtctggggagcgaacagaac
agcgaatccagtgcctttgatgtgccgcagctcacaactctgatccagaaactggtcccg
ggctcgaggctggtggaggatatcggccaggaggtcctctacgtcctgccgtacagcggt
gccaaagagggtgcatttggggacttgtttcaggaactggacagccgcctgggtgaactt
ggcatctccagctacggcatttctgacacgagcttggaagagatcttcttgaaggtggcc
gaggacactggtgtggatgcagaaggtgctgctgaggctcctaagaacttcagcacatct
acgccagcctctggttatactctccggaccctcagcgaggacactgagacagctgatgcc
gaaccagccgaggaaccaacggagacagatctcttgcgcggcgtgggtgcccaggattcc
ggccacctgacgggctgggcactgacctaccagcagctgcatgccctcttcaccaagagg
ttcctgtatgcccggcgtagcacgaggggatttctggcacaaatagtgcttcctgccctc
ttcgtctgcatcgcactgctcttcagcctcatcgtcccgccctttggcaaatacccgccg
ttgcctctcacgccctggatgtacgggccccaaacgacctttttcagtgaggactccctg
ggcgacgcagactctgctcgactcctggaagcccttctggaagagccgggctttggcacc
aagacgcagtcatgctcgcacgcttggaactttgtgaacccggaagtgcccccgtctctg
gtggaagttcttcggaatggcaactggactctgggagacccctctccgggatgcgagtgc
agttcccaggtggctcgaaagatgctccccgattgcccggaagcggccggagggctaccg
ccccctcagatgcagacggacactggtgacattctgcagaacctcactgggaggaacatt
tcggattacctggtgaaaacatacagcagagttattcgcaaagggttaaaaaccaagaaa
tgggttaatgaacagcggtacggcggattctctctgggtgcccgtaccatgcaggctctg
ccaaccacccaggaggtgaatgccactgtgaagatgatccgtggcttcctcagcatcact
aagggaagttccctggacaggctcttgggcaaccttagtagcttcgttgatggactggag
tcacctgagaatgtcaaggtctggttcaacaacaaggggtggcacgccatggtgtctttc
gtcaacctggccaacaacggcctcctccgggccggcctgcctgcaggtgtagaccgctcg
cgctacagtatcacggcgattaaccaccccctcaacatgaccaaagagcagctctcggaa
gcagccctgatggccacctcggtagacgtgctggtctccatctgtgtgatgttcgccttg
tccttcgtccccgccagcttcgtcctcttcctcatagaggagcgggtcagcaacgccaag
cacctgcagattgtcagcggcatgaaacccggcgtctattggctgggcaacttcgcctgg
gacatgtgcaattatctcgtcccggccgttctggtggtcctcatcttcatctgcttccag
cagaagtcctacgtgtccccagctaacctcccaaccctgattctgctgctcctcctctac
ggatggtccatcacacctctcatgtacccagcatccttcttcttcagcgtccccagcacg
gcttatgtggccctgacgtgcatcaacctctttatcggcatcaacggcagcgtggcaact
ttcgtcctcgaactctttacagataagaaattgaatgacgtcaacgtcatcctaaagaag
gtcttcctggtcttcccccacttctgcctgggccggggactgatcgacatggtgaagaac
caagccatggctgacgcctttgagaggttcggcgacaagcattttgtttctccactcagc
tgggacctggctgggaaaaatatctttgccatggccgtcgagggcttcgtctttttcatc
ttcaccatcctggtgcagtacaagttcttcatccgcctccgggtcgatattgtaatgccc
ccgtatagatctttggtttaccggatgaacaaaaagccagccgtggatcgcttatgtgtg
ggaatccctccaggagaggttggagccagaaccgaatgcaccgttatgggcattcccagc
atctccaccaacctctctggctttggctgcttcatggaggaacacatagcagacccaaca
gcttacggtatctacattgtggaccggcgtttccggggcttggacgagtcatgcacgcag
ctgacctcgttcctctacagcttctgccagcaaacccggcggcagcgcatcatccagcgc
aaccgcaccgagcggctctctgaccttctggactggaagtacctgggcagggtggttcag
tgggggttatccacccttggcctaatgcagtacgcagacagacccgctggccggtacagc
ggggggaacaaaaggaagttgtccacggccattgccctcattggagcaccgcctgtcgtc
ttcctggatgagccgacgaccggcatggacccacgagcaaagcgtttcctgtggaactgc
atcctgggcgtgatcaaggacggcaggtctgtggtgctcacgtcacacagcatggaggag
tgtgaggcactgtgtaccagaatggccatcctggtgaacggccgtttccgatgcttgggg
agcgtgcaacacctgaagaaccggttcggagacggatacacgatcgtgctccgggtctcc
gggaccgacccagaccttggccccctggagaagttcatccgggattccttccccagcata
attctgaaggagaagcaccactgtaccctccagtaccaactgccgtcccgtggctgttcc
ttggccaagatctttggcatcctctccactcaccagggcacctaccacatcgaagactac
tccgtctcccagaccaccctggaccaggtgtttgtacattttgctaaggaccaaagtgat
gaagaacatccgaaggaagcctcctctgcggccaacccgacgaaccccagcagccgctgg
cgaagaatcgccggtttcttggacgataagagtgtgcgagaaagccaagtctga
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integrated database retrieval system
