Gekko japonicus (Schlegel's Japanese gecko): 107121276
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Entry
107121276 CDS
T04299
Symbol
SMG8
Name
(RefSeq) SMG8, nonsense mediated mRNA decay factor
KO
K18734
protein SMG8
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gja03019
]
107121276 (SMG8)
Messenger RNA biogenesis [BR:
gja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
107121276 (SMG8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
Motif
Other DBs
NCBI-GeneID:
107121276
NCBI-ProteinID:
XP_015279652
UniProt:
A0ABM1L115
LinkDB
All DBs
Position
Un
AA seq
1018 aa
AA seq
DB search
MVGATPVRSPVNLRELLLAGAEGGSATTTEGGSPATTPTSSGGGGGGPGVASPAEEEEVC
VVGIFGKTALQLCSEKAALVNTVCDRQVFPLFQRETEARPADGEGVELAAESPAPSSSSS
SSSSSSSSSSSSSSSSSSSLQGDYNLLQAYYSPECKVLYLVLTSICDSRQLLQACRDLDA
MGDGRVPGGLGGHPAQGGSPLPHAEAHEFWKHQEKLHCLSLLYLFSVCHILLMVHPTCSF
DITYDRVFRALDGLRQKVLPSLKSAIKDCPVGKDWKLNCRPCPPRLLFLFQLNGALKVEP
SPGRGQELCGHLEKPPPKKHSPKRRLQHALEDQIYRIFRKSRVLTNQSINCLFTVPANQA
FVYIVTGGAQEGDDPIAVLLDQLRSNCTAREAESILTPALTGPRRYQMMRHGRQQLSFHV
ESSSSGSSGQLVDCTLKEFLFQHVELVLGKKGFDDSVGRNPQPSHFELPTYQKWVATALK
LYEVAIEGKDSDPSSVAGELTSKILSSIKVLEGYLDIDTKFSENRCQKALPMAHSAYQSN
LPHNYTMTVHKNQLAQALRVYSQHARGPAFHKYALQLHEDCYKFWSNGHQLCEERSLTDQ
HCVHKFHLLPKSGEKPEPDRNPPVLYHNSRARSTGACNCGRKQAPRDDPFDIKAANYDFY
QLLEEKCCGKLDHINFPIFQPSTPDPAPAKNESSASPLEGEVEKLKEKEPQTQGESTSLS
LALSLGQSTDSLGTYPADPQGGGDTTEAHGQAAESKGEKRPSLVDRQASTVEYLPGMLHS
NCPKGLLPKFSSWSLVKLGPAKAYNFHTGLDQQGFILGTNYLMPWDIVIRTRTEEEGDLD
TNSWPAPNKAIPGKRSAVVMGRGRRRDDVARAFVGFEYEDARGRRFMCSGPEKVMKVMGG
GPKESAIKALNSDMPLYILSSNPGRGLKPHYAQLMRLFVVVPDAPLQIILTPQVQPGPPP
CPIFYPEKQEITLPPDGLWVLRFPYAYVTERGPCFLPKENQQLMSYKVIRGILKAVVQ
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atggtgggcgcgacgcccgtgcgcagcccggtgaacctgcgggaactgctgctggccggg
gcggaggggggtagcgccaccaccacggaggggggcagccccgccaccacgcccaccagt
agcggtggcggtggcggcgggcccggggtggcctcccccgcggaggaagaggaggtgtgc
gtggtgggcatctttggcaaaacggctttgcagctctgctccgagaaggcggccttggtg
aacacggtctgcgacaggcaagtgttccctctcttccagcgggagaccgaggccaggccg
gcggacggggaaggcgtcgagctggccgcggagtcccctgcgccttcctcctcctcctcc
tcctcttcctcgtcttcttcctcctcttcttcttcttcctcctcctcctcctcctctttg
cagggggattacaacctcttgcaagcctattacagcccggagtgcaaggtgctctacctg
gtgctcacctccatctgcgacagccgccagctgctgcaagcctgtagggacctcgatgcc
atgggggatggccgggtgcctgggggcctaggggggcaccctgcccaaggtggctcccca
ctgcctcacgcggaggcccacgagttttggaagcaccaggagaaactgcactgcctcagc
ctgctgtacctcttctccgtctgccacatcctgctgatggtgcacccaacgtgctccttc
gacattacctacgaccgggttttccgggctttggacgggctgcggcagaaggtgctgccc
tccctgaagtctgccatcaaggactgccccgtcggcaaggactggaagctcaactgtcgg
ccttgcccgccccgccttctcttcctcttccaactcaacggggccctcaaagtggagccc
tctccgggcagggggcaggagctttgtgggcatctggagaagcctcccccgaagaagcac
tcccccaagaggaggctccagcacgctctggaggaccagatctaccgcatcttccgcaag
agccgggtgctgactaaccagagcatcaactgcctcttcaccgtcccggccaaccaggcg
ttcgtttacatcgtgacgggcggagctcaagagggcgacgaccccattgcagtcttgctg
gatcagctccgcagcaactgcacggcccgagaggcggagtccatcttgacgcctgccttg
accgggcccaggaggtaccagatgatgcgccatgggcggcagcagctatccttccacgtg
gagagcagcagctctggttcttcgggccagctggtggactgcaccttgaaagagttcctt
ttccagcacgttgagcttgtccttggcaagaagggcttcgatgacagcgtgggcaggaac
ccccagccgtcccacttcgagcttcctacttaccagaagtgggtggccactgccctgaaa
ctgtatgaagtagcaattgaaggcaaagacagtgacccttcttctgttgctggggagctg
acttccaagattttgagcagcatcaaagtcttggaaggctacttggacatcgacaccaag
ttctcggagaaccgttgccagaaggccttgccgatggcccacagtgcataccagtccaac
ctgccgcataactacaccatgacggtgcataagaaccagctggctcaggccttgcgggtg
tacagccaacatgcccggggaccggcttttcacaagtacgccctgcagctgcacgaagac
tgctacaagttttggagcaacggccaccagctgtgcgaagagaggagtctgactgaccag
cactgcgtgcacaagtttcatttgctccctaaatcaggggaaaaacctgaaccggatcgg
aacccaccagtgttgtaccacaacagccgtgctcgctccactggggcctgcaattgtgga
aggaagcaggcacccagagacgatccctttgacatcaaagcagcaaattatgatttctat
cagctgttggaagagaaatgttgcggcaaactggatcatatcaacttccccatatttcag
ccgagtacaccagacccggccccggccaagaatgaatcgtcggccagccctttggaaggg
gaagtggaaaaactgaaggagaaggagccgcaaactcaaggcgaaagcaccagcctgagc
ttagctctcagcttgggccagtccacagatagtttgggtacctaccctgcggatccacaa
ggtggaggggacaccacagaggctcatgggcaggctgcagaatccaaaggggaaaagagg
ccaagcttggtagaccgtcaggcatccacggtggagtatctccctgggatgctccactcg
aattgcccaaagggtcttctgcccaaattttccagctggtcactggtgaaactcggccct
gccaaggcttacaacttccacactggcttagaccagcagggcttcatcctagggacaaac
tatttgatgccttgggacatcgtgatcaggacaaggactgaagaggagggagacctggac
actaattcctggccagctcccaacaaggccattcccgggaagagaagcgcggtcgtcatg
gggagaggaaggcgtcgggacgatgtggctcgtgcctttgtggggtttgagtacgaagat
gctcgcggccggaggttcatgtgttccgggccggagaaagtcatgaaggtgatgggaggg
ggaccgaaagaatcggccatcaaagctctcaactccgatatgcctttgtacatcttgtca
tccaacccggggcgagggctgaaaccacactacgctcagctgatgagactttttgttgtg
gttcccgatgcgcctctccagataatactgacaccgcaggtccaaccagggccccctcct
tgcccgatattttaccctgagaagcaagagataactcttcctcctgacggactgtgggtc
cttcgatttccttatgcttatgtgacagaacgggggccctgctttcttccgaaagaaaac
cagcagttgatgagttacaaggttattcgagggattctaaaggctgtggtacaatag
DBGET
integrated database retrieval system
