Gekko japonicus (Schlegel's Japanese gecko): 107121340
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Entry
107121340 CDS
T04299
Symbol
APEX2
Name
(RefSeq) apurinic/apyrimidinic endodeoxyribonuclease 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gja03400
]
107121340 (APEX2)
Enzymes [BR:
gja01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
107121340 (APEX2)
DNA repair and recombination proteins [BR:
gja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
107121340 (APEX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Zn_ribbon_GRF_2
Motif
Other DBs
NCBI-GeneID:
107121340
NCBI-ProteinID:
XP_015279739
LinkDB
All DBs
Position
Un
AA seq
533 aa
AA seq
DB search
MRLVSWNVNGLRAGAGSAGLKRLLAALDADVVCLQETKITRDLLGEPLAIVEGYSSYFSF
SRKRSGYSGVATFCKTGATPEAAEEGLSGLFTKHGGAVGCYGDTDDFTPEELQALDSEGR
AVVTRHRICTLGGQETTLVLINVYCPRADPDKPERGDFKLRFYRLLQARAEALLRAGSHV
VILGDINTAHKPIDHCDPGDLESFWENPGRRWLDSFLWEPGTDSQDEKPFVDTFRFIHPR
QEDAYTCWCNLTGARQTNYGTRIDYILADRALALSELKDARIMPEVLGSDHCPVQAQLRA
HFVAAPVCPPLCTRFLPEFAGTQQKLSRFLVKVEQTSLPDGPPKRSGTELSLRGDPKKRR
TGPLKKGQGDLRSFFRASSNSAAGVSDLGRCPSGLSVIQKGAEDSGKATPVDAAKRTGEG
LAVGKAVRVPRETAASLREEPAVDVSSEETKNCGDNPAPSGPDQSAALWRSLLPGPARPP
HCKAHGEPCVLRTVKKQGPNCGRRFYVCARPLGKPSDPRARCDFFLWAPRGNR
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgaggctggtgagctggaacgtgaacgggctgcgggccggggcgggctctgcggggctg
aagcggctgctggcggcgctggacgcggacgtggtctgcttgcaggagaccaagatcacc
cgggacctgctgggggagccgttggcgattgtggagggctacagctcctatttcagcttc
agccgtaagcgcagtggctactcaggggttgcaacgttctgtaaaaccggggctaccccg
gaggcagcagaggagggtctgtccgggctgttcaccaaacatggcggggcggttggctgc
tatggagacacggacgacttcacgcccgaggagttgcaggcactggacagcgagggccga
gccgtggtcacccggcaccgtatttgcaccttgggagggcaggagaccaccctggtgctc
atcaacgtctactgccctcgtgccgaccctgacaaaccggaacgcggggacttcaagctg
cgattctaccgcctcctgcaagcgcgggcggaggccctcctgagagccggcagccatgtg
gttatcctgggagacatcaacacggctcacaagcccatcgaccactgtgaccccggggat
ctggagtccttctgggagaatcccgggcgccgctggctggacagtttcctgtgggagccc
ggcacggactcccaggacgagaaacccttcgtcgacacgttccgcttcatacacccccgg
caggaggatgcctacacctgttggtgcaacctgacgggcgcccggcagaccaactacggc
acccgcatcgactacatcctggccgatcgcgctctggcgctgtccgagttgaaggacgcc
cggatcatgccggaagtcctgggctcggaccactgccccgtccaggcgcagctgagagcc
cactttgtggccgcccccgtctgcccgccgctctgcacccgctttctgcctgaatttgcc
ggcacccagcagaagctcagccgcttcctggtgaaggtggagcagaccagcctgccggac
ggccccccgaaacggagtgggactgagctgagcctgcggggggatcctaaaaagagacgg
accggccccctgaagaagggacaaggggatttgcgcagcttcttccgagccagtagtaac
agcgcagctggggtatccgatctgggcaggtgcccttcaggattgagcgtaattcagaag
ggagcagaggattctgggaaagcgactcctgttgatgccgctaaaaggacgggcgagggg
ttggcggtgggaaaagccgttcgcgtaccacgggagaccgcggcgagcttgagagaggaa
cccgccgtggatgtgagcagcgaggaaacgaagaactgtggggacaatcccgctccctcc
ggacccgaccagtcggctgccctgtggagatccctgttgccgggccccgctcgcccaccc
cactgcaaggcccacggggagccctgtgttttgcggacggtgaagaagcaagggccgaac
tgtgggcggcgtttctacgtctgcgcccggcctctggggaagccctccgatccccgtgcg
cgctgcgacttcttcctctgggcccctcgggggaatcggtag
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