Gekko japonicus (Schlegel's Japanese gecko): 107121788
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Entry
107121788 CDS
T04299
Symbol
PBRM1
Name
(RefSeq) polybromo 1
KO
K11757
protein polybromo-1
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107121788 (PBRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gja03021
]
107121788 (PBRM1)
03036 Chromosome and associated proteins [BR:
gja03036
]
107121788 (PBRM1)
Transcription machinery [BR:
gja03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107121788 (PBRM1)
Chromosome and associated proteins [BR:
gja03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
107121788 (PBRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
107121788
NCBI-ProteinID:
XP_015280267
LinkDB
All DBs
Position
Un
AA seq
1705 aa
AA seq
DB search
MRRLAFRGAGCTLKLDSMGSKRRRATSPSSSASGGDFDDGHHSTNTPGPSRKRRRLSNLP
TVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLK
MEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAACKLWDLYLRTKNEFVQKGDAEEEEE
EEDGHDNQGTISEISSPGYLKEILEQLLEAVVVATNPSGRLISELFQKLPSKVQYPDYYA
IIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLVKNAKTYNEPGSQVFKDANAIKKIFNM
KKAEIEHSELTKSSLRARTANLAASKLTGPSSQGKGNVVDERNSANKYYRNKRAVQGDRL
SAITMALQYGSESDEDAVLAAAARYEEGESEAESITSFMDTASPLYQLYDTVRNCRNNQG
QLIAEPFFHLPSKKKYPDYYQQIKMPISLQQIRTKLKNHEYETLDHLECDLNLMFENAKR
YNVPNSAIYKRVLKMQQVMQAKKKELARRDEIEDGDSMISSATSDAGSSKRKSKKNIKKQ
RMKILYNVVLEAREPGTGRRLCELFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRSDKYS
GEEGMIEDMRLMFRNARHYNEEGSQVYNDAHILEKILKEKRKELGPLIEDEEVASPKLKL
SRKTGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYLTIK
RPVDMEKIRSHMMANKYQDIDAMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRR
DIEGDEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSLAEILAVDPSFPNKAPLT
FDIIRKNVETNRYRRLDLFQEHMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDELCK
NGEILLSPALSYTTKHLHNDVEKEKKEKLPKEMEEDKLKREEEKREAEKSEDSSGGSGLS
SLHRTYSQGCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFYRP
NETFHLATRKFLEKEVFKSDYYNKIPVNKILGKCVVMFVKEYFKLCPENFRDEDVYVCES
RYSAKTKSFKKIKLWTMPISSVRFVPRDVPLPVVRVASVFANTDKVDEEKHTETLEESKV
GDSVLSLEKDKEDVPVEMSNGEPGCHYYEQLCYNDMWLKVGDCVFIKSHGLVRPRVGRIE
KMWVRDGAAYFFGPIFIHPEETEHEPTKMFYKKEVFLSNLEETCPMTCILGKCAVLSFKD
FLSCRPTEINENDVLLCESRYNESDKQMKKFKGLKRFSLSAKVVDDEIYYFRKPIVPQKE
PSPLLEKKIQQLEAKFAELEGGDEDVEEIGEEEGEVAEAPAIPQLQTPLSNELDIMPYTP
PQSTPKSAKGSVKKEGSKRKINMSGYILFSSEMRAVIKAQHPDYSFGELSRLVGTEWRNL
ETSKKAEYEERAAKVAEQQERERAAQQQQQNSSPRAGTPVGALMGVVPPPTPMGMLNPQL
TPVAGMIGGYPPVLPPLQGPVDGIVSMGSMQPLHPGVPPPHQLPPGMPGIPPQGVIGQSV
SSMVGAPAPGSPFGQQMGVLGPPGQQAPPPYPGQNPITQQVIQQPTTPMFVSPPPKTQRL
LHSEAYLKYIEGLSADSNSISKWDQTLSARRRDVHLSKEQESRLPTHWLKSKGAHTTMAD
ALWRLRDLMLRDTLNIRQAYNIENV
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atgaggagattggcttttcgtggtgctggttgtactctgaagttggattccatgggttcc
aagagacgaagggctacctctccttctagcagtgccagtggaggagattttgatgatggt
caccattccacaaacacaccaggcccgagtagaaagaggagacggctttccaacctccca
acagttgatccaattgctgtgtgtcatgaattatacaatacaatcagagattacaaagat
gaacaagggaggcttctgtgtgagcttttcattcgagcccccaaacgaagaaatcagcca
gattactatgaagtggtttctcagcctattgatttaatgaaaatccaacaaaaactaaaa
atggaagaatatgatgatgtgaacttgctaactgctgacttccagctgctatttaataat
gcaaaatcctactataagccagattctcctgaatataaggcagcctgcaaactatgggat
ttatatctacgcacaaaaaatgaatttgttcaaaagggagatgctgaggaggaggaggaa
gaggaggatggccatgacaatcaagggacaatttctgaaatatcttctccaggttattta
aaagagattcttgaacagcttctcgaggccgtagttgtagccacaaatccatcaggccgc
ctcattagtgagctttttcagaagcttccctctaaagtgcaatatcctgactattatgca
ataatcaaggagcccatagatttgaagactattgcccagagaatacagaatggaagttat
aaaagcattcatgcaatggccaaggacatagacctgttagttaagaatgccaaaacctac
aatgagcctgggtctcaagtattcaaggatgcaaatgcaattaaaaaaatatttaatatg
aaaaaggcagaaattgaacattcggaattgaccaaatcaagtctccgagccaggactgca
aatttggctgcttccaagctgacgggtccttcctcacagggtaaaggcaatgtggtcgat
gagagaaattctgctaataaatattaccgtaacaagagagcagtccaaggtgatcgttta
tcagcaataactatggcactgcaatatggatctgaaagtgatgaagatgctgttctggct
gctgctgctcgttatgaagaaggagaatcggaagctgagagtattacatccttcatggat
actgccagtcctctctatcagctttatgatacagttagaaactgccggaacaaccagggt
cagctcatagcggaaccttttttccatttgccctccaagaaaaaatatcctgattattat
cagcaaatcaaaatgcctatttcgttgcagcaaatcagaacaaaactgaagaaccatgaa
tatgaaacacttgaccatttggaatgtgatctcaacttgatgtttgaaaatgccaaacgt
tacaatgttccaaattcagccatttataaaagagtattgaaaatgcagcaggttatgcag
gcaaagaaaaaggagcttgctagaagagatgaaattgaagatggggacagtatgatctct
tctgccacgtctgacgctggaagttcaaaaagaaaaagcaaaaagaacataaagaaacag
cgaatgaaaattttatacaatgttgttctggaggcgcgagagccaggcactggccgaagg
ctgtgtgaactgtttatggtgaaaccttccaaaaaagactatccagattactacaaaatc
atcttggaaccaatggatttaaagataatagagcataacatacgcagtgacaaatattca
ggggaagagggaatgatagaagatatgagattaatgttccggaatgcaaggcattataat
gaagaaggctcgcaggtatacaatgatgctcatatcctggagaagattcttaaagaaaaa
agaaaagagctgggacctctgatcgaagatgaggaggttgcttctcccaaactgaaatta
agtagaaaaactggtatatcccctaaaaaatcaaaatacatgactccaatgcaacagaag
cttaatgaggtgtatgaagcagtgaagaactacacagataagagaggcagaaggctcagt
gctatttttctacgacttccatctcggtcagagcttcctgactactacctgaccattaaa
aggcctgtggatatggagaagatcagaagtcacatgatggccaacaagtaccaggacatc
gatgccatggtagaagattttgtaatgatgttcaataatgcctgcacttacaatgaacca
gaatccttgatttacaaagatgccctggttctgcataaagttttgcttgagaccagaaga
gacatagaaggcgatgaagattctcacgtccccaatgtaacactgctgatccaggagctt
atccataatctttttgtctccgtcatgagtcatcaagatgatgagggcaggtgctatagt
gactccttagctgaaattcttgctgttgatcccagttttccaaataaagcacccctgact
tttgatatcatacgaaaaaatgtagagactaaccggtacaggagattggacttgtttcaa
gagcatatgtttgaagtgctggagcgagcaagaaggatgaaccggactgattcagagatt
tatgaggatgcagtagaactacagcaattctttatcaaaatccgtgatgaactctgcaag
aatggagagattcttttatcaccagccctcagttacaccaccaaacatcttcataatgat
gtagaaaaagagaagaaggaaaagcttccaaaggaaatggaggaggacaaactcaaaaga
gaagaggaaaagagagaagctgaaaagagtgaagattcttctggaggatcaggactgtct
agtttacacagaacatacagccaaggttgcagctttaagaacagcatgtatcatgttgga
gattatgtatatgttgaacctgcagaagccaatttgcagcctcatatagtctgtattgaa
cgattgtgggaagattcagctggagaaaaatggttgtatggctgctggttttatcgacca
aatgaaacattccatcttgcaacccgaaaatttttggagaaggaagtgttcaagagtgac
tattacaataaaattcctgtgaataaaattctaggtaaatgtgtggtcatgtttgttaag
gagtattttaagctgtgtccagaaaattttagggatgaagatgtctatgtttgtgaatca
cgttactctgcgaagacaaagtcttttaagaaaataaaattgtggactatgccaattagt
tctgtacgatttgtcccgcgagatgtgcctttgcctgttgttcgggttgcatcagtcttt
gctaatacagacaaagttgatgaagaaaaacatactgaaacgttagaggaaagcaaagtg
ggagacagtgtccttagccttgaaaaggataaagaagatgttccagtagaaatgtcaaat
ggagaacctggttgtcactactatgaacagctttgttacaatgatatgtggctgaaggtt
ggggattgtgtgtttataaaatcacatggcttagtccgaccaagagttggcagaatagaa
aaaatgtgggtaagagatggagctgcatatttctttgggccaatctttatacatccagag
gaaacggagcatgagccgactaaaatgttttataagaaggaagtttttttgagtaacctg
gaagagacttgtcccatgacttgcattttgggaaagtgtgccgtgctgtctttcaaagac
ttcctgtcctgcaggccaactgagattaatgaaaatgatgttctcctctgtgaaagccgc
tataatgaaagtgacaaacagatgaagaagtttaagggactgaaaaggttttctctctct
gcaaaagtagtagatgatgaaatttactacttcaggaagcccatagttcctcagaaggag
ccatctccactgcttgaaaagaagattcagcagctagaagcaaaatttgctgaactggaa
ggaggtgatgaggacgttgaagagattggggaagaggaaggtgaagttgcagaagctcca
gctattcctcagcttcagactccattgtctaatgaactagatataatgccgtatacacca
ccacagtccactccgaagtctgccaagggtagtgtaaagaaggaaggatcaaaaagaaag
atcaacatgagtggttacatcctatttagtagcgaaatgagagcagttatcaaagctcag
catccagactattctttcggagagctcagtcggcttgttggaacagagtggcgaaactta
gaaacatccaagaaagcagaatatgaagagcgggcagctaaggttgctgagcagcaggag
agagagcgagcagcacagcaacagcagcagaattcttccccccgggcagggactcctgtg
ggggctcttatgggggtggtaccaccaccaacaccaatggggatgctcaatccgcagttg
acacctgttgcaggcatgataggtggctatccaccagtgctgccacctttacaaggccca
gttgatggcattgttagcatgggcagcatgcagccacttcaccctggggtgcctccaccc
caccaacttccaccaggcatgccaggcatcccacctcagggtgttataggccaaagtgtt
tcttccatggtaggagctccagccccaggaagtccatttggacagcagatgggtgttctt
ggccctccaggccaacaggcaccaccaccctatcctggtcaaaatcccataactcagcag
gtcattcagcagcctacaactcctatgtttgtctctcctccgccaaagacacagaggctt
cttcactctgaggcttatctaaaatacattgaaggtctaagtgctgattcaaatagcatt
agtaagtgggaccagactctttcagcacgaaggcgtgatgtccatctctcaaaagaacaa
gagagccgtcttcctacgcactggttgaagagcaaaggtgcccatacgacaatggcagat
gcactttggcgccttcgagacttgatgttgagagatactcttaatatccgtcaagcgtac
aacatagaaaatgtttaa
DBGET
integrated database retrieval system
