Gekko japonicus (Schlegel's Japanese gecko): 107122105
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Entry
107122105 CDS
T04299
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon, catalytic subunit
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03030
DNA replication
gja03410
Base excision repair
gja03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107122105 (POLE)
03410 Base excision repair
107122105 (POLE)
03420 Nucleotide excision repair
107122105 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gja03032
]
107122105 (POLE)
03400 DNA repair and recombination proteins [BR:
gja03400
]
107122105 (POLE)
Enzymes [BR:
gja01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
107122105 (POLE)
DNA replication proteins [BR:
gja03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
107122105 (POLE)
DNA repair and recombination proteins [BR:
gja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
107122105 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Zn_ribbon_3CxxC
Motif
Other DBs
NCBI-GeneID:
107122105
NCBI-ProteinID:
XP_015280622
UniProt:
A0ABM1L3T5
LinkDB
All DBs
Position
Un
AA seq
2289 aa
AA seq
DB search
MAQKKGGGGRRWQRAAPAGDADEETPRDDGSSLSALRRLERSQWTDKIDGQFGFERMKEP
AERTGWLINMHPTEVLDEDKRLVSAVDYYFIQEDGSRFKVALPYRPYFYIATRKGCDREV
SSFLSKKFQGKIAKLDTVPKEDLDLPNHLVGLKRNYIKLSFNTVDDLIKVRREISPAVKK
NRVQDLATDTYTAMLTSALTGSNLASEEERPSKKTADQMDNILDMREYDVPYHIRLSIDL
KIHVAHWYNIRYRGSSFPPEITRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMI
SYMIDGQGYLITNREIVSEDIEDFEFTPKPEYDGPFCVFNEPDEAHLIQRWFEHVQETKP
TIMVTYNGDFFDWPFVEARAAVHGMNMKQEIGFQKDSQGEYKAPPCIHMDCLRWVKRDSY
LPVGSHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYMYMKYVHP
FIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAYHANIIFPNKQEQEFNKLTNDGHVLES
ETYVGGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVEKTMCHAIEEEEGIPLDQVTNF
QEVCDEIKVKLNSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDF
NKPGADCQRRMAWQWRGEFMPASRGEYHRIQQQLESEKFPSLFPDGPPRAFHELSREEQA
KYEKKRLTDYCRKAYKKVHVTKLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWK
KKLAAAVEMGDASEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVC
FTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIQSTNAKKPKVTISYPGAM
LNIMVKEGFTNDQYQELLDPASLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRY
AVFNEDGSLAELKGFEVKRRGELQLVKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDV
LYSKGANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSC
RFIISKKPEGSPVTERAIPLAIFQAELSVRRHYLRKWLKTPSLQDFDIRTILDWDYYIER
LGSTIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDVYKQKRISELFTSEGKRQVT
ANVPQDGTQCTQATDMEDFGLAKPLQTRVPLSSKRKRIPTAEESQLQSQNLELTQSWREI
LGPPPSTGTTKEERLVWLRYHKKKWELQARQRLERRKRRRLADGEAVLGGGLIRDGQARG
LGNYLRKTARSILDIPWQIVQIAETSQPGLFRLWALIGSDLHCLKLNIPRIFYVNQRIPK
SEEGPVYRKVDRTLPRLNPVCNLYEYSVPEDMYQEHINEINASLSAPDIEGVYETQVPLI
LRALIRLGCICMVNRHLVRHLTGRETEAFDLEHLEMRSLAQFSYLEPGCIKHIYLYHNSQ
GKKALFGLFIPSQCKASVFVVDTVRSNQMPNLTSMYSAEHRVMVEKVGQELLPPEKHTFE
VRAETDLKTVYRAIQRLLLGYKDERRGPTLIAVQSNWDLKRLVNGMPVFEEFPLVPVQVI
DDINYGVLDWQRHAARRMIRHYLNLDTCLSQAFEMSRYYHIPIGNLPDDISTFGTDLFFS
RHLHCHNHLLWLSPTSRPDLGGKEADDSRLVMEFDERVSVEINHPGCYSTVCVELDIQSL
AVNTILQSHHINDMEGASSMCISFDVIQQASLEDMVTGNQASIPASYDETALCSHTFRIL
KSMVVGWVKEITQYHNVYADNQVIHFYRWLHSPTSLLYDPALHRTLHNMMKKLFLQLVAE
FKRLGSSVVYANFNRIILCTKKRRIEDALAYVEYITNSIHSKEIFHSLTISFSRCWEFLL
WMDPANYGGIKGKVASSVHCGEKETGNKDAADEESSEGEEVDDEEEEEGAEEDDGVEEQL
ENNWNIMQYLPQTASCQNYFLMIVSAYIVAVYHSMKEEMRRNSPGNTPIKRRANSQISQE
PTVEAGAMPGMITFSQEYVANELTQSFFTITQKIQKKVSGSRRTTEPSEMFPALPGSYLM
LNNPALEFIKCVCQVLSLDTNITNQVSKLKRDLLRLIEVGEFSEEAQFRDPCRSYVLPEV
ICRNCNFCRDLDLCKDPALSQDGSVLPNWMCSNCQARYDSDAIEMALVEALQKKLMAFTL
QDLVCQKCNGIKDTHMPVYCSCAGDFDLLLPTKTFMEHLKIFQSIAKHYNMAYLLETIKW
LLQMNPQFL
NT seq
6870 nt
NT seq
+upstream
nt +downstream
nt
atggctcagaagaagggcggcgggggccgccgctggcagcgggccgcccccgctggggac
gccgacgaagagacgccgcgtgatgatggctcctcactctctgccctgaggcgcttggag
cgcagccaatggacagacaagatagatggacagtttgggtttgaaaggatgaaggaacct
gcagagagaacaggctggttgatcaacatgcatccaacagaagttttggatgaagataaa
cgcttggtcagtgctgtggactattatttcattcaggaggatgggagtaggtttaaggtg
gcattgccctataggccgtatttctatattgcaacccgaaagggttgtgaccgagaagta
tcatccttcctttccaagaagttccaagggaaaatagcaaagcttgacactgtacccaaa
gaggatcttgatttgccaaatcatctggttggcctgaagcgaaactacatcaaactctcc
ttcaatacagtggacgacctaataaaagtgcgcagggagatctcacctgctgtgaagaag
aacagggtacaggacctagcgacagatacctacaccgccatgctaaccagtgctctgaca
gggagcaacctggccagtgaagaggagaggccttctaagaagactgcagaccagatggac
aatattcttgatatgagggagtatgatgtcccctaccatattcgtctgtccatcgatctg
aagatccatgtggctcactggtacaacattcgctatcggggcagcagctttcctcctgag
atcacccgccgagatgacctggtagagcggccagatcctgttgttctagcttttgacatt
gagaccactaaactccctttgaagtttcctgatgcggaaacggaccagataatgatgatc
tcctacatgattgatggccagggttacctgatcacaaacagggagatcgtttcagaggac
attgaagattttgagtttactcccaaaccagagtatgatggccccttctgtgtctttaat
gaaccagatgaggcccatcttatccaacggtggtttgagcatgttcaggagaccaagccc
accatcatggtgacttacaacggagacttctttgactggccctttgtggaagccagagcc
gcagttcacggaatgaacatgaagcaagagatcgggttccaaaaggacagccaaggggaa
tacaaagctcctccgtgcatccacatggattgtctcaggtgggtcaagagagacagttac
ctcccagtaggaagccacaacttgaaagcagccgctaaagcaaagctgggctatgaccct
gtagagctggatcctgaagagatgtgccggatggctactgaagaacctcagacgctggcc
acctactcagtgtccgatgctgttgctacctattacatgtacatgaagtatgttcaccct
ttcatctttgccttgtgcaccatcatcccaatggagcccgatgaggtgctgcgaaagggt
tctgggacactgtgtgaagcgctgctcatggtccaggcttatcatgccaacatcatcttc
cccaataagcaagagcaagagttcaacaagctcaccaatgatgggcatgtgctagagtcg
gagacatatgttggaggccatgtggaggcactggaatccggggtcttccgcagtgacatt
ccctgccgctttaagatgaatccggctgcctttgacttcctgctacagcgtgtagaaaag
acaatgtgccatgccattgaggaagaggaaggcataccgctagatcaagttaccaacttt
caggaggtttgtgatgaaatcaaagtcaagctgaactccttgaaggacgttcccaacagg
attgagtgtcctctaatctatcatctggacgtgggggccatgtatcccaacatcatcttg
accaacagactgcagccatcagcaatggtagatgaggccacctgtgctgcctgtgacttc
aacaagccaggtgcggattgtcagcggaggatggcctggcagtggagaggagaattcatg
ccagcgagccgcggcgagtaccaccggatccagcaacagctggagtccgaaaagttccct
tctctcttccctgatggaccgccccgggcattccatgagctgtctagagaggagcaagcc
aaatatgagaagaaacgtttaacagattactgtcgcaaggcctacaagaaagtccacgtg
accaaattggaggagcgtgtcaccaccatctgccagcgggaaaactccttctatgtagac
actgtgcgggctttcagggaccgtcgctatgagttcaagggactacacaaggtgtggaag
aagaaactggctgcagccgtggaaatgggtgatgcctctgaagtgaagcgctgcaagaat
atggagatcttgtatgactccttgcaactggcgcacaagtgcattctcaactccttttat
ggctatgtcatgcgcaaaggggctcggtggtactccatggaaatggctggaattgtctgc
ttcactggtgcaaacatcatcacgcaagccagggagctgattgagcaaattgggagaccg
ctggagctggacactgatgggatctggtgtgtccttccaaacagcttcccagaaaatttt
gttatccagtcaaccaatgccaagaagcccaaagtgacaatctcatatccaggtgcaatg
ctgaacattatggtgaaggaagggttcacaaatgatcagtaccaggagttgttggaccca
gcctcactgacgtatgttactcgctcagagaacagcattttcttcgaggtggatgggccg
tatctggcaatgattctgcctgcctccaaggaagagggcaagaagctgaagaaaagatat
gctgtgtttaatgaagatggctccctcgcagagctgaaagggtttgaggtgaagcggcgt
ggggagctgcagctggttaagatcttccagtcatccgtgtttgaggctttcttgaagggc
accaccttggaggaagtctatgcgtcagttgccaaagtggctgactattggcttgatgtc
ctttacagcaagggtgccaacatgcctgactcagagctgttcgaactgatctctgaaaac
cgatccatgtcacgcaaactggaggattatggagagcaaaaatccacctctatcagcaca
gctaagcgcctggctgaattcctgggggaccagatggtgaaggatgcaggcctgagctgt
cgatttattatctctaagaaaccagaaggctccccagtcactgagagggccatcccactg
gccattttccaggcagagctctcagtacgaaggcactatctccggaaatggctgaagact
ccttcactgcaggattttgacatccgaaccatcctagactgggattattacattgagaga
ctgggcagcaccatccagaaaatcatcaccatcccagcagcactgcagcaggtgaagaac
ccagttcctcgggtccgccatcctgactggctgcacaagaaactcttggagaaaaatgat
gtctacaaacagaagagaattagtgagctattcacaagtgagggcaagagacaggtcact
gctaatgtgccacaggatggcactcagtgcacacaggctaccgacatggaagattttggg
cttgccaagcctttgcaaacaagggttcccctgtcaagcaaacgtaaacgtatccctaca
gctgaggagagccagctgcaatcccagaatctggaattaacccaatcctggagggagatt
ctgggcccgcccccatccactggcaccacgaaggaagagcgcctggtctggctgcggtac
cacaagaagaagtgggagcttcaggctcggcagcgcctcgaacgccggaaaaggcggcgg
ttggcagatggcgaggcagtcctgggtggggggctgatccgggatggtcaagccagaggg
ctaggaaactacttgcgcaagacagcacgcagcatcttggacataccatggcagattgtg
cagattgctgagaccagccagccgggcctgttcaggctatgggctttgattgggagtgac
ttgcactgccttaagctgaacatcccacgtatcttctatgtcaaccagcgcatccctaaa
tcagaagagggccctgtctataggaaggtggacagaactcttcctcgcttgaaccctgtc
tgcaatttgtatgagtactctgtgcctgaggatatgtatcaggagcacatcaatgaaata
aatgccagtctctctgcccccgacattgagggtgtatatgagacccaggtgccattaata
ctgcgagccttgatccgcctgggctgcatttgcatggtgaacaggcatctagttaggcat
ctcaccggccgggagaccgaagcctttgacttggaacacctggagatgcgctctctggcc
cagttcagctacctagagccaggctgcatcaagcacatctatctatatcacaactcccag
ggcaagaaggcactctttggcctcttcatcccctctcaatgcaaagcatctgtctttgtg
gtagacacggtacggagtaatcagatgccaaacctcaccagtatgtactcagcagagcac
cgcgttatggtggagaaggtgggccaagagctgcttccgccagagaagcacacttttgaa
gtgcgggctgagacagacctcaagacagtctacagggcaattcagcgtcttctgctgggc
tacaaggatgagcgcagggggcccaccctgattgctgtgcagtcaaactgggacttgaag
aggttggtgaatgggatgcctgtctttgaggagttcccactggttcctgtccaggtaatt
gatgacatcaactatggagtcctggactggcagcgccacgctgccaggcgcatgatccgg
cactacctcaacctggacacatgcctatctcaggcctttgaaatgagcagatactatcac
attcctattgggaaccttcctgatgacatctccacctttggcacagacctgttcttctcc
cgccacctccactgccacaaccatctcctgtggctttctccaacctcccgtccagacctg
gggggtaaagaggcagatgacagtcgcctggtcatggagtttgatgaaagggtctctgta
gagatcaatcacccaggctgctattccacagtgtgtgtggaactggatatccagagcctt
gctgtgaacaccatcttgcagtcgcaccacatcaacgacatggagggggcatccagcatg
tgcattagcttcgatgtgattcagcaggcatcgctggaggacatggtcacggggaaccag
gccagcatccctgccagctacgacgaaacggctctttgttcccacactttcaggatcctg
aagagcatggtggtaggctgggtgaaggagatcacgcagtaccacaatgtctatgctgat
aaccaggtgatccacttctaccgctggctgcactcaccaacatccttgctctatgaccct
gcactgcaccgcacactgcacaacatgatgaagaagctgttcttgcaattggttgcagag
ttcaagcgcctcggctcctcagtggtttatgccaacttcaaccgcatcatcttgtgcacc
aagaaacgccgcatagaggatgccctcgcctatgtagagtacatcaccaacagcatccat
tcgaaggaaatcttccactccttgacaatttccttctcgcgctgctgggagttcttgctc
tggatggatccggccaactatggtgggatcaagggcaaagtggcttccagcgtccactgt
ggggagaaagagacgggcaataaagatgcagcagacgaggaaagcagtgaaggggaggag
gtggatgatgaagaagaagaagaaggagcagaagaagacgacggtgtggaagaacagcta
gaaaacaactggaacatcatgcagtacttgcctcagacagcctcttgtcagaattacttc
ctcatgattgtgtctgcctacatagttgctgtgtaccatagcatgaaggaggaaatgcgg
cgtaactcccctgggaacacccccatcaagagacgggcgaacagccaaatatcccaggag
cccacggtagaggcgggtgctatgcctggcatgatcaccttctcccaggaatatgttgcc
aacgaactcacccagagcttcttcaccatcacccagaagatccagaagaaagtgagcggt
tctcgccgcaccacagagccttcagagatgtttccggccctgcctggctcatacctgatg
ctcaacaatccagccctggagttcattaaatgtgtctgtcaggtattgtctctggacact
aatatcaccaaccaggtgagcaaactgaaacgggacctgcttcgcctaatagaagtgggc
gaattctcagaagaggcccagtttcgggacccctgtcgctcctacgttctcccagaggtg
atctgcaggaactgcaacttctgcagggacttggacctctgcaaggacccagccctctcc
caggatggctccgtcctgcccaactggatgtgttccaattgccaggcccgctacgactcc
gatgccatagagatggctctggtggaagccttgcagaagaagctgatggccttcaccctt
caggatctggtgtgccagaagtgcaacggcattaaggacacccacatgcctgtgtactgc
agctgcgccggggactttgacctcctcttgcctaccaagaccttcatggagcatctgaag
atcttccagagcattgccaagcactacaacatggcctacttgctggaaaccattaagtgg
ctactacagatgaacccacagtttctctga
DBGET
integrated database retrieval system
