Gekko japonicus (Schlegel's Japanese gecko): 107122292
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Entry
107122292 CDS
T04299
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107122292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gja03019
]
107122292
03041 Spliceosome [BR:
gja03041
]
107122292
Messenger RNA biogenesis [BR:
gja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
107122292
Spliceosome [BR:
gja03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
107122292
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
DUF4175
Motif
Other DBs
NCBI-GeneID:
107122292
NCBI-ProteinID:
XP_015280824
LinkDB
All DBs
Position
Un
AA seq
286 aa
AA seq
DB search
MSSDSSKKRKPKVIRTDGGPQEGKRSRPDADQDARYYSEEAEVDLRDPSKDYELYKQTCQ
DLQKLMAEIQELKSKGNKDSAAEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIELVSTEEFYKEAPPEISKPEVTT
DDPHQQTLSRLDWELEQRKRLAEKYKECLANKEKILKEIEVKKEYLSNLQPRLNSIMQAS
LPVQEYLSLPFDQVHKQYETARHLPPPLYVLFVQASAYGQACGESF
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccgattccagcaagaaacggaagcccaaggttatccgcacagatggaggacca
caggagggcaagagaagcaggccagatgctgaccaggatgccagatactacagcgaggag
gcagaagttgatctgcgagaccccagtaaagattatgaactttacaaacagacttgccag
gaccttcagaagcttatggcagagatccaggagctgaaaagcaaaggcaacaaagacagt
gctgctgagatagaggaacgtcgcattcagagctgtgtgcacttcatgaccctgaagaaa
ctcaaccgtttagctcacattcgattaaagaagggaagggaccagactcatgaggccaaa
cagaaggtggacgcatatcacttgcagctacagaatctgttgtatgaagtcatgcacctg
cagaaggagatcacaaaatgcctggagttcaaatccaaacatgaggaaattgagctggtg
agcactgaagagttctacaaagaagcccctccagaaatcagcaagccggaggtcacaact
gatgaccctcaccagcagactctttcccgtctcgattgggagctggagcagcgcaaacgg
ttggcagagaaatataaagaatgcctagccaacaaagagaagattctgaaagagatagaa
gtgaagaaggaatatctgagcaacctccagcctcgactcaatagcattatgcaggcttct
ctccctgtccaagagtacctctcactaccttttgaccaggtgcacaagcagtacgagaca
gccaggcacctcccaccgcctctttacgttctctttgtccaagctagtgcctatggccag
gcctgtggtgagtctttttaa
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