Gekko japonicus (Schlegel's Japanese gecko): 107122630
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Entry
107122630 CDS
T04299
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM9
KO
K10649
tripartite motif-containing protein 9/67
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gja04131
]
107122630
04121 Ubiquitin system [BR:
gja04121
]
107122630
Membrane trafficking [BR:
gja04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
107122630
Ubiquitin system [BR:
gja04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
107122630
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
fn3
ANCHR-like_BBOX
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4_4
PRY
zf-RING_5
RING_XB3-XBAT31
zf-RING_2
DUF2203
Motif
Other DBs
NCBI-GeneID:
107122630
NCBI-ProteinID:
XP_015281231
LinkDB
All DBs
Position
Un
AA seq
726 aa
AA seq
DB search
MDEMEEELKCPVCGSFFREPLILPCSHNLCQACARNILVQTPEAESPQSRRASGTADYDY
LDLDKMSLYSEADSGYGSYGGFASAPTTPCQKSPNGVRVFPPAVPLPPPHLPPPLPPPLP
PHLPPPASAASSSSLAPVPPNSCLTCPLCHRSLILDERGLRGFPKNRVLEGVIDRYQQSK
AAALRCQLCEKAPKEATVMCEQCDVFYCDPCRLRCHPPRGPLAKHRLLPPAQGRVSRRLS
PRKISTCTDHELENHSMYCVQCKSPVCYQCLEEGKHASHEVKALGAMWKLHKSQLSQALN
GLSDRAKEAKEFLVQLRNMVQQIQENSVEFEACLVAQCDALIDALNRRKAQLLSRVNKEH
EHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQISDALIRRVHLTEDQWGK
GTLSPRMTTDFDLNLDSAPLLQSIHQLDFVQMKGTVPAAPILQLEECCTHNNSATLSWKQ
PPLSTVQVDGYILELDDGNGGQFREVYVGKETMCTVDGLHFNSTYSARVKAFNKTGVSPY
SKTLVLQTSEVAWFSFDPSTAHSDIIFSNDNLTVTCNSYDDRVVLGKTGFSKGLHYWELS
IDRYDNHPDPAFGVARVDVLKDVMLGKDDKAWAMYVDNNRSWFMHNNSHTNRTEGGITKG
ATVGVLLDLTRRTLTFSINEDQQGPVAFENLEGVFFPAVSLNRNVQVTLHTGLPVPDFYH
SRGTMQ
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggacgagatggaggaggagctgaagtgcccggtgtgcggctccttcttccgcgagccg
ctcatcctgccctgctcgcacaacctgtgccaggcctgcgcccgcaacatcctggtgcag
acccccgaggccgagtccccgcagagccggcgcgcctccggcacggccgactacgactac
ctggacctggacaagatgagcctctacagcgaggccgacagcggctacggctcctacggc
ggcttcgccagcgcgcccaccaccccctgccagaagtcgcccaacggcgtgcgcgtcttc
ccgccggccgtcccgctcccgccgccccacctgccgccccccctgccgccccccctgccg
ccccacctgccgccccccgcctcggccgcctcctcctcctcgctggcgccggtgccgccc
aactcctgcctcacctgcccgctctgccaccgcagcctcatcctcgacgagcggggcctc
cgcggcttccccaagaaccgcgtcctcgagggggtcatcgaccgctaccagcagagcaag
gcggccgccctccgctgccagctgtgcgagaaggcgcccaaggaggccaccgtcatgtgc
gagcagtgcgacgtcttctactgcgacccctgccgcctccgctgccacccgccccgcggc
ccgctggccaagcaccgcctcctgccccccgcccagggacgggtcagccgccgcctcagc
ccccgcaagatctccacctgcaccgaccacgagctcgagaaccacagcatgtactgcgtc
cagtgcaagagccccgtctgctaccagtgcctggaggagggcaagcacgccagccacgag
gtcaaggccctgggcgccatgtggaagctccacaagagccagctctcccaggccctgaat
ggattgtcggacagagcgaaggaagccaaagagttcctggttcagctccggaacatggtg
cagcaaatccaggagaacagtgtggagttcgaagcctgtctggtggcccagtgcgatgcc
ctgatcgacgccctcaaccggaggaaagcccagctgctctcgcgggtcaacaaggaacac
gagcacaagctgaaggtggtgcgggatcagatctctcactgcacggtgaagctacgccag
acaacgggcctgatggagtattgtctggaagtcatcaaggagaacgaccccagcggattc
ctgcagatctccgacgcgcttatccggagggtccacctgaccgaggatcagtgggggaag
gggacgctctccccgaggatgacgacggactttgacctgaacttggacagcgcaccgctg
ctgcagtccatccaccagctcgacttcgtacagatgaaaggtacagtgccggccgccccg
atcctgcaactggaagaatgctgcacccataacaacagcgccaccttgtcctggaagcag
ccgcctctctccaccgtgcaggtggacgggtacatcctggaactggatgacgggaacggg
gggcagttcagggaggtatacgttgggaaggagaccatgtgcaccgtggacgggcttcac
ttcaacagcacctacagcgctcgggtcaaggctttcaacaaaaccggggtcagcccctac
agcaagacgctggtcctgcagacctctgaggtcgcctggttctccttcgatcccagcacc
gcccactccgacatcatcttctccaatgacaacctgaccgtcacttgcaacagctacgac
gaccgggtcgtgctgggcaagaccggcttctccaaagggctccactactgggagctgtcg
atcgaccgctacgataaccacccggacccggcctttggggtggctcgcgtagacgtgctc
aaggatgtcatgctagggaaggatgacaaggcctgggccatgtacgtggacaataaccgg
agctggttcatgcacaacaactcgcacacaaacaggacggaaggaggcataaccaaaggg
gccacggtgggcgtcttgctcgacctgaccaggaggaccttgactttctccatcaatgaa
gaccagcaggggcctgtggcctttgagaacctggagggcgtcttctttcccgccgtcagc
ctgaacagaaacgtgcaggtgactctccataccggtttgcccgtcccggacttctaccat
tcacggggcaccatgcagtaa
DBGET
integrated database retrieval system
