Gekko japonicus (Schlegel's Japanese gecko): 107123038
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Entry
107123038 CDS
T04299
Symbol
USP42
Name
(RefSeq) ubiquitin specific peptidase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gja01002
]
107123038 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gja04121
]
107123038 (USP42)
Enzymes [BR:
gja01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107123038 (USP42)
Peptidases and inhibitors [BR:
gja01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107123038 (USP42)
Ubiquitin system [BR:
gja04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107123038 (USP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
107123038
NCBI-ProteinID:
XP_015281686
LinkDB
All DBs
Position
Un
AA seq
1436 aa
AA seq
DB search
MTIVDKTSESSNTSGCQKQPGNSLVPASGEMESGSGGWSTVSSLEAPKRKISLGPVPGAA
VYSNSSVPDKSKPSTQKDQSLGDGIAPPQKILFPAEKVCLKWQKTHKVGAGLQNLGNTCF
VNSALQCLTYTPPLANYMLSLEHSKNCHEQGFCMMCIMQSHINLALSNSGNTIKPTSVIN
DLRRIAKHFRFGSQEDAHEFLRYTVDAMQKACLNGSNKLDRYSQATTLIYQIFGGYLRSR
VKCMNCKAVSDTFDPYLDIPLEIKTAQSVNKALELFVKPEQLDDENSYKCSKCKKMVPAS
KRLTIHRASNVLTLSLKRFANFNGGKIGKEVKYSEHFDMRPYMSQSSGDPVIYALYAVMV
HAGFSCHAGHYYCYIKASNGQWYQMNDSTVSVSDIRSVLSQQAYMLFYIRSHEVKNGSEH
ANSAHTPGRSSPRPVINQRVVNNKQTSPGFIGPQLPPHMMKLQNSNHLNGSASLKEAPSS
SVASPSTMPLKRPASVPSATSVPNWTLNRSASASATDPSKKQKITISINKLSTHQTASHN
SCSAENLNKPVPSSTVSNPSAVQSTSSASAASAANRIPKPPPAGEPSSTPVVNGKSKLSS
GILVPYGPESSEDSDEEPKGPVKENGLPKPFNGIPTGSVGNVTESSCASCHSAEEEAPPL
LHEPLKSVAVNGAISVDEAPKENGLPPEDVACQAKPGKSVENPFSKANGLHGKGPPAALS
PVPEDMILDSFRYTQLKTSPEETSASGTEKTAQEDGCLEALSRVPCDKPSKILTNLLSNI
QDLPSPSDPEPISTKDNLCESVAAETQNSHLDSGGQCDPQSKSPGKDAEFCTEGDTEDHS
AKMRGPKEGKAAWKKSPVHIRGTPEGAEKLAQSPFRKSDAECQPLKLVALNVVEKSQETP
NGMKNAADAPLPEVASAARLDVGTEIQSSKDEDGPRRGNEGLREDAERQEPKSQSLMKEK
VGTSKKVDREHYRSKRGRSESEEREAGCSQNDRHYYKKKCCYHREQSKRECSESEEREAG
RGQNDGHHYKKRCCFSTERTKRGRSESREREASHSQNYGHHYKKRCCYSREPTKQGYSRR
EYYNGNKYRFPSSPDPGRSLGKSPWPRSHSREKADLERSQYCPWKGEPSWSRVGYHQEIP
RRWEKYRPDSYYYSSHIAKSSQDRKVCHGEKDDNKSSHIYNKPYKDYYKSRWTHDPPVKE
RERDHVSSSKADMYRCPVPSQRPEKYPLEREAPVPEEHSLHPGAERPKERKRKCPSPEGS
DSNPEKKCQRRSSPSEPLEEQKSRKHKKSKKKKKKSKDKHRERDYRHHQDSDPSASGSET
EAHKHKKKKKKRKKRAKRSESCNEPLEPHVPKSAHAEGNGTWETTETLSGACQKHGRQAQ
DGAAAACWKSKCAEGGDRGGCHFSTDHHDAATEAPFHKDHSWTVSRSASNDIPYKE
NT seq
4311 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaaaacatctgagtcctcaaacacttctggctgtcagaagcagccc
ggcaactccctggtgccggcttctggagagatggaatcaggctctggaggatggagcact
gtgtcgtctctggaagctccaaaacgcaagatctccttgggaccagtgccaggggctgcc
gtttattccaattcatcagttccagataaatccaaaccctccactcagaaggatcagtct
ctcggtgatggcattgctccaccgcagaagatcctctttccagccgagaaggtgtgcctg
aaatggcaaaaaacgcacaaagtcggagctggcctccagaaccttggcaatacatgtttc
gtcaactctgctctacagtgtctgacttacacgccccctctagccaattacatgctttcc
ctggaacactccaaaaactgtcacgagcagggattctgtatgatgtgtatcatgcagtct
cacatcaacctagccctttccaactctggcaacaccatcaaaccgacgtctgtcatcaat
gacctccgacgaatagcaaagcatttccgtttcggaagtcaggaagatgcgcatgaattc
ctccgctatactgttgatgctatgcagaaagcatgtctcaacggtagcaacaagttggat
cgatactcacaagccactactctcatttatcaaatatttggaggatatctgagatctaga
gtaaagtgcatgaactgcaaagcagtttctgatacttttgatccctacctggatattcca
ttggagataaagaccgctcaaagtgtaaacaaagctctggagctgtttgtcaaaccagaa
caactggatgatgaaaactcgtataaatgtagcaagtgtaaaaagatggttcctgcctca
aaaagattgacaatccatcgggcttcaaacgttctcaccctgtccctaaaacggtttgca
aatttcaacggtgggaaaattggaaaggaagtgaaatattccgaacattttgatatgcgc
ccatacatgtcccagtcaagcggagacccagttatttatgcgttatatgcagtcatggtg
catgctggcttcagctgccatgcaggacattactactgctacatcaaggccagcaacggg
cagtggtaccagatgaacgactccacggtctcagtcagtgacatccgatccgttctgagt
cagcaagcctacatgctcttttatatcaggtctcacgaggtgaagaacggcagtgaacac
gcaaattccgctcacaccccagggcggtcttctccccggccagttatcaaccagcgagtg
gtgaataacaagcagacgtcgccagggtttattggaccgcagctccctccacacatgatg
aagttgcagaattcaaaccatttgaatgggtctgcgtccctgaaagaagcgcccagcagt
tccgtggccagccccagcaccatgcccctcaaaaggccagcttccgtcccttcagcgact
tctgtcccaaactggacgctcaatagatcggcttcggcgagtgccaccgacccttcgaaa
aagcagaagatcaccatcagtattaacaagctgtccactcaccaaacggcctctcacaac
agctgttccgcggagaacctcaataagccggtcccttcctcgaccgtttctaacccttcc
gcggtgcagtctacctcaagcgcctctgccgcctcggctgctaacagaatccccaaacca
ccacccgccggcgaaccttcttccacgccggtggtgaacggcaagtccaagctcagttcg
ggcatcttggtcccgtacggacccgaatcttcggaagactccgacgaagagcccaagggg
ccagtgaaagagaatggtctccccaagcctttcaacggcatcccaacggggagcgtggga
aacgtgacggaaagctcctgtgcgtcctgccacagtgctgaggaggaggcgccaccgctg
ctgcacgagccactaaaaagtgtcgctgtcaatggtgctattagtgtcgacgaggctccg
aaagagaacggtctgccgcccgaggatgtcgcttgccaagccaagcctgggaaatctgta
gaaaacccgttctcaaaagccaatggattgcatgggaaaggaccacctgccgctctgtcc
ccggtccccgaagacatgatcttggactccttcagatacacacaactgaaaacatcgcca
gaagaaaccagtgcaagcggaacagagaaaactgcccaggaggatggctgtttggaagcc
ttgagcagagttccctgcgacaagcccagcaagatcctcaccaaccttctcagcaacatc
caggatctcccatctccttctgaccccgaacccatttctaccaaagacaacctctgtgaa
agcgttgccgcagaaacgcagaattcccatctcgatagcggcgggcagtgtgaccctcag
tcaaagtcacctggaaaagacgccgaattctgtacagaaggcgacacggaggatcactcc
gcaaaaatgagaggaccaaaagaagggaaagctgcttggaaaaagagccctgtgcacatc
agagggacacctgagggagcagagaaactggcgcaaagccctttcaggaagtctgacgct
gaatgccaacctctcaagctggtcgcgctgaacgttgttgagaaaagccaagaaacgccg
aatggcatgaagaatgctgcggatgccccactccctgaggttgcttctgctgcaaggctc
gatgtgggtacagagattcagagttcaaaggacgaggatgggcccaggcgggggaacgaa
ggtctcagagaagacgcagaaaggcaggagccaaagtcccaatccctgatgaaggagaaa
gttggtacctcgaaaaaagtggaccgagagcactaccgcagcaagagaggccgctctgaa
agtgaagagcgggaggccggctgcagccagaacgacaggcattactacaagaagaagtgt
tgctaccacagagagcaaagcaagagagaatgctcagaaagtgaagagcgggaggccggc
cgcggccagaatgatgggcatcactacaagaaaaggtgttgcttcagcacagagcgaacg
aaaagaggccgctcagaaagcagagagcgggaagccagccacagccagaactatgggcat
cactacaagaaaaggtgttgctacagcagggagccaacgaagcaggggtattccagaaga
gagtactacaacgggaacaagtaccgattcccctcgagccctgaccctggaagaagttta
ggaaagtccccctggccccggtctcacagcagagagaaagcagacctcgaacggagccag
tattgcccctggaaaggagagccgtcgtggagcagagtgggttatcatcaggagatccca
aggagatgggaaaaataccgacccgatagctactattattcctcccacatagcgaaaagt
agccaggatagaaaagtctgccatggcgagaaggacgataacaaatctagtcatatttac
aacaaaccatataaagactattacaaaagcagatggactcacgacccaccagtgaaggaa
agagagagggaccatgttagcagttcgaaagcagacatgtaccgctgtccggtcccctcc
cagcgcccggagaaatatcccctagagagagaggcgccggtgcccgaggagcacagtttg
catccaggggccgagcgtccaaaggagcggaaaaggaaatgccccagcccagagggcagc
gacagcaaccctgaaaagaaatgccagaggaggagctcaccgagcgaacctctcgaggag
cagaagagccggaagcacaaaaagtcgaagaagaagaagaagaagtcgaaagataaacac
agagagagagattacaggcatcaccaggactcagatccctctgcatcaggctctgagaca
gaggcccataaacacaagaagaagaaaaagaagaggaagaagcgtgcaaagagatctgaa
agctgcaacgagcctctagagccccacgtcccaaagtcagctcacgcggaaggcaacggc
acttgggagacaaccgaaactttgtcgggggcttgtcagaaacacggcaggcaggcccaa
gatggagcagctgcggcctgctggaaatccaagtgcgcagaaggtggtgacagaggaggc
tgccacttctctacagaccaccatgacgctgctacagaggcacctttccataaagaccac
agttggacagtctctagatctgcaagcaatgacatcccatataaagagtaa
DBGET
integrated database retrieval system
