Gekko japonicus (Schlegel's Japanese gecko): 107123044
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Entry
107123044 CDS
T04299
Symbol
PMS2
Name
(RefSeq) PMS1 homolog 2, mismatch repair system component
KO
K10858
DNA mismatch repair protein PMS2
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03430
Mismatch repair
gja03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
107123044 (PMS2)
03460 Fanconi anemia pathway
107123044 (PMS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gja03400
]
107123044 (PMS2)
DNA repair and recombination proteins [BR:
gja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
107123044 (PMS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
CLZ
Motif
Other DBs
NCBI-GeneID:
107123044
NCBI-ProteinID:
XP_015281697
LinkDB
All DBs
Position
Un
AA seq
860 aa
AA seq
DB search
MEAGEISGVQSAKAIKPIDRKSVHQICSGQVVLSLSTAVKELVENSIDAGATSVEVKLKE
YGTELIEVSDNGCGVEEENFAGLTLKHYTSKIQDFSDLIHVETFGFRGEALSSLCALSDV
SILTCHTSAKVGTRLVFDHNGKITSRTPYPRQQGTTVTVQQLFYNLPVRHKEFQRNIKKE
YAKMVQVLQAYCIISTGVRIKCTNQVGQGKKQLVVGTSGSPSLKENIGSIFGQKQLQSLI
PFVQLPPSEAICEEYGLNSADMPTDLYIITGFVSRCDHGVGRSTTDRQFFFINQRPCDPT
KVSKVVNEVYHMYNRHQYPFIVLNICADSGSVDINVTPDKRQIMLQEEKFLLAVLKTSLM
GMFGSDVNKLVISWKLPDAEGIFKPGLQDETEMPCLEMRSSLSPNPKSAMTVAKLRESFS
LRQETETRVQSFENTKQQCSSPGQRQLLKFFSVSGSPNKETGSGKKSTRETDMESSKPLL
PHGNTKKFAGETDSGCGSISVESDMGLSTPELGSCFSSESAVSSPDEQPHVSKEEIQREA
LEMNGQTQRSECDLNPSKKHALALEVTCSSPDVKRRKITPPLSQAGSSPERNDAQNCAGL
SQYDVPLEVEKKITTLEFSMSSLTDRVKKLIQRQQEKAEVLNYRKFRAKISPGENKSAED
ELRKEISKEMFAKMDIVGQFNLGFIIVRLNSDLFIVDQHASDEKYNFEMLQQHTILQGQK
LIAPQNLNLTAVNESVLMENLEIFRKNGFDFVINEGAPVTQRVKLISLPTSKNWTFGPQD
IEELIFMLSDCPGVMCRPSRVRQMFASRACRKSIMIGTALDIKEMKKLVTHMGEIEHPWN
CPHGRPTIRHIANLDMVSQE
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgggagagatctctggtgtgcagtctgctaaagcgatcaagcccatagaccgt
aaatcggttcaccagatctgctctgggcaggtggtgctgagtttgtctactgcagtgaaa
gagctggtggaaaacagcatagatgctggtgctaccagtgttgaagtgaagcttaaagaa
tatgggacagagcttattgaagtgtctgataatggctgtggcgtagaagaagaaaacttt
gcaggcttgactctaaagcattatacttccaagatacaagacttctctgatcttatacat
gttgaaacgtttggctttcgaggtgaagcactcagctctctgtgtgcattaagtgatgtt
tctattttgacttgccacacgtctgcaaaagttggaacacgtctcgtgtttgatcacaat
gggaaaatcacttcaagaaccccttaccctcgacagcagggaacgactgtcactgtgcag
cagttgttttataacctgccagtacggcataaggaatttcagcgcaacataaaaaaggag
tatgcaaaaatggttcaggtgttgcaagcgtactgtatcatttcaaccggtgttcgaatt
aagtgtaccaatcaggttggccaaggcaagaagcagcttgtggtgggcaccagtgggagc
ccttccttaaaggaaaacattgggtcaatatttggacaaaaacagctgcaaagcttgatt
ccttttgttcagctgccccctagtgaagctatctgtgaagagtacggcttgaattctgct
gacatgccaaccgatctttatattatcacaggctttgtttcccgctgtgatcatggcgtt
gggaggagtacgacagacagacaattcttctttattaaccagaggccttgcgacccaaca
aaagtttccaaagttgtgaatgaagtgtaccacatgtataatagacaccagtatcccttt
attgttctcaacatatgtgcagattctggaagcgttgacatcaatgtgacacctgacaaa
aggcagataatgctgcaggaagagaaatttctgttggccgttctgaaaacctctttgatg
ggaatgtttggtagtgatgttaacaagcttgtcatcagttggaagctaccagatgccgaa
ggaatctttaagccagggcttcaagatgagacagaaatgccttgcttggaaatgcgcagt
tccttgtctccaaatccaaaaagtgcaatgactgtagccaagcttagagagtctttctct
ctccgtcaagagacagagaccagagttcaaagttttgaaaataccaagcagcagtgcagt
tcccctgggcagagacaactactgaagttttttagcgtttcaggatctccaaataaggag
actggttctgggaagaaatctacacgtgaaactgatatggagtcaagcaagcccctgctt
cctcatggaaataccaagaaatttgcaggagagacggactctggatgcggcagcatctct
gtggaatccgacatgggtctgagcacgccagagctcggtagttgtttcagtagtgaaagt
gcagtcagttcccctgatgaacaaccccatgtttccaaagaagaaattcaaagggaagct
cttgaaatgaatggacaaacacagaggtcagagtgtgatttgaacccaagcaaaaagcat
gcgttagccctggaggtcacctgttcttccccagatgtgaagcgtcggaagatcactccg
cctctgtcacaggcaggaagctcaccagagaggaatgatgctcagaactgtgccggttta
tcacagtatgacgtacctttggaagttgaaaagaaaatcacaacgctggagttttctatg
agttcgttgacggacagggtgaagaaactaatccagcgacaacaggagaaggcagaagtg
ctgaattacagaaaattcagagcaaaaattagccctggggaaaataaatcagcagaggat
gaattaagaaaagaaataagtaaagagatgtttgccaaaatggacatcgtcggtcaattc
aatttaggatttataatagtcagattgaactctgacctgttcatcgttgaccagcatgct
tcagacgaaaagtacaactttgagatgttgcagcagcataccatactacaaggacagaaa
ctgattgcacctcagaaccttaatttaactgctgtcaatgagagcgtgttgatggaaaac
ctggagattttcagaaaaaatggatttgattttgtcatcaatgaaggagcacctgtaacc
caaagagtaaagctcatttcgttgccaacaagcaaaaattggacttttggcccccaagat
atagaggagctgattttcatgttgagtgattgccctggggtgatgtgcagaccttcccga
gtgaggcagatgtttgcttctcgagcgtgtaggaagtcaatcatgattggaacagcgctg
gatataaaggagatgaagaaactggtcacccacatgggtgagattgagcacccttggaac
tgtccgcatggaaggccgaccataaggcatatagccaacctggatatggtttcacaagaa
tag
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integrated database retrieval system
