Gekko japonicus (Schlegel's Japanese gecko): 107123084
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Entry
107123084 CDS
T04299
Symbol
COL25A1
Name
(RefSeq) collagen type XXV alpha 1 chain
KO
K24356
collagen type XXV alpha
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
gja00536
]
107123084 (COL25A1)
Glycosaminoglycan binding proteins [BR:
gja00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107123084 (COL25A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
107123084
NCBI-ProteinID:
XP_015281748
LinkDB
All DBs
Position
Un
AA seq
805 aa
AA seq
DB search
MVGKTSQEAKGQDAKSETSCFGGQRCCWGRTAPSSWLLAAFLLSVVSIASCVYLGMKTSD
LQARVLAIETAQGDLSAASYQLLPSYSLDQLNSWMQEKVERLLAQKSYEHMAKIRIAREV
PSECNCPPGPPGKRGKRGRRGEIGPPGQPGPQGPPGPKGEKGDQGDQGPRMVFPKINHGF
LSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEPG
LMGPQGPPGQKGSVGATGVPGMDGQQGEPGVIGERGLPGLKAPEHIGVGFILIRFRIPVL
GRFKYPLNEGFASLETFSDVLSKKEEGGWQGDPGEAGPKGDAGEKGDPGSSAAGIKGEPG
ESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGDKGEAGPPGKGERGE
PGVPGPKGRSGESGARGPKGSKGDPGDKGDLGSVGPKGPPGQKGDQGATEIIDYNGNIHE
ALQRITTLTVTGPPGPPGPQGLQGSKGEPGSPGIPGADGEQGPKGSKGDTGDPGIPGEKG
GIGLPGLPGSNGMKGDKGDVGLPGPQGPSIIGPPGPPGPHGPPGPMGPHGLPGPKGASGL
DGKPGPRGADGPVGPHGLAGPKGDRGEKGVPGDPGPRGPYGLPGKDGEPGLDGFPGPRGE
KGDVGEKGEKGFRGVKGEKGEPGQPGLDGLDAPCQLGPDGLPMPGCWQKFSGLLFNFKDK
KTKIDSVQKAKDFLNQQQNLNQDDKSTVDDLEDEGTSDREIDDTSSDSSSTTGTSESKKG
EAAPKMLKMNLKHKKKKKRKRETEL
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggtggggaaaacaagccaggaagccaagggtcaggatgccaagagcgagaccagctgc
tttggaggtcagcgctgctgttggggcaggactgcgccctccagctggctgctggctgcc
ttcctcctctccgtggtatccatcgcttcctgtgtgtatctggggatgaagaccagtgac
cttcaggccagggtcttggccattgagaccgcccaaggggacttgtctgctgcttcttac
cagctgctgcccagctattccttggatcagctgaattcctggatgcaggaaaaagtggag
cgacttctggctcagaagtcctatgagcatatggcaaaaatcagaatagcgagagaagtt
ccttccgaatgcaactgtccaccaggtcctcctggtaaacgaggtaagcgaggaagaaga
ggagagattggaccccctggtcaacctggtcctcaaggcccacccggtccaaaaggggag
aagggagatcaaggtgatcagggccctcggatggtgtttcctaaaatcaatcatgggttt
ctctctgctgatcagcagctcattaaacgccgcctcattaagggagaccaagggcaagct
ggaccccctgggccgcctggacctccagggccaagaggtcctcctggagacactgggaag
gatggcccccgagggatgcctggtgtaccgggagagccaggaaagccaggggaaccaggc
ctgatgggacctcaggggcctccgggacaaaagggctctgtcggtgcaactggtgtccca
ggaatggacggacaacagggtgaacctggtgtaattggagagagaggacttcctgggctt
aaggcacctgaacatattggagttggtttcatcctcatacggtttagaattccagttttg
gggagattcaagtaccctttgaatgaaggctttgcaagcctggaaactttcagtgatgtt
ctgagcaaaaaggaagaagggggatggcagggtgatccgggtgaagctgggccgaaaggt
gatgcaggagagaagggtgatcctgggtcttctgctgcaggaataaagggggaacctgga
gaatcaggtcgaccaggacaaaagggtgaacctggactcccggggcttcctggactacct
ggtattaagggtgaacctggtttcattggcccacagggagaacctggattaccagggttg
cctgggacaaagggtgacaagggagaagcagggcctcctgggaaaggtgaacgaggtgaa
ccgggagttccagggccaaaggggaggtcaggtgaatctggagctagaggcccaaagggg
tcgaagggtgatccaggagacaaaggtgatttgggttctgtaggtccaaagggcccacct
ggacagaagggtgatcaaggtgccacagaaatcatcgactacaatggcaatatccatgaa
gccttacagaggattaccaccctaactgtcacgggtcctcctggccctcctggcccccag
ggattgcaagggtcaaagggtgagccaggatccccaggaataccaggagctgatggggag
caggggcctaaaggttcaaaaggggatacaggtgaccctggaataccaggagaaaaagga
gggattggacttccaggactgccaggatccaatggcatgaaaggagacaaaggagatgtt
ggcttgccaggtccccaaggtccttctattataggaccgccaggacctcctggcccgcat
ggtccaccggggcctatgggacctcatggactaccaggcccaaagggagcatctggctta
gacggaaagccaggaccccggggtgcagatggcccagttggtccacatggtcttgcaggt
ccaaaaggagacagaggtgaaaagggagttccgggagatcctgggcccagaggaccatat
ggcttgcctggcaaagatggagaacctggccttgatggtttccctggtcctcgtggagaa
aagggtgatgtaggagaaaagggagaaaagggattccgtggagttaagggggaaaaaggg
gagccaggccagcctggcctggatgggctggatgccccttgccaattggggccagatggg
ttaccaatgcctggctgttggcaaaagttttcaggacttttattcaactttaaagacaag
aaaactaaaattgactctgtccaaaaagccaaggactttttgaaccaacaacaaaatctg
aaccaagatgataaatcaacagtggatgatctggaagatgaaggaactagtgacagagaa
atagatgatacttcaagtgactctagcagtaccacgggaacttctgagtcgaagaaagga
gaagcagcacctaagatgttaaaaatgaatttgaaacacaagaagaagaagaaacgtaag
agagaaactgaactttaa
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