Gekko japonicus (Schlegel's Japanese gecko): 107123173
Help
Entry
107123173 CDS
T04299
Symbol
PNN
Name
(RefSeq) pinin, desmosome associated protein
KO
K13114
pinin
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03013
Nucleocytoplasmic transport
gja03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107123173 (PNN)
03015 mRNA surveillance pathway
107123173 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gja03019
]
107123173 (PNN)
03041 Spliceosome [BR:
gja03041
]
107123173 (PNN)
Messenger RNA biogenesis [BR:
gja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107123173 (PNN)
Spliceosome [BR:
gja03041
]
Complex C
Other components
EJC/TREX
107123173 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
107123173
NCBI-ProteinID:
XP_015281847
UniProt:
A0ABM1L7B0
LinkDB
All DBs
Position
Un
AA seq
686 aa
AA seq
DB search
MAVAVRALQEQLEKAKESLKHVDENIRKLTGRDPNDVRPAQGRLLTLTGPGGGRGRGSIL
LRRGFSDSGGGPPAKQRDLEGATSRLAGERRTRRESRHESDAEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEDWNEHNAKIIKYIRTRTKPH
LFFIPGKMCAATQKQFDDSQKKLNALFESRRIEFAEQINKMEARPRRQSVKEKEHQEVQK
EEKKEDQNKEQEEGXXXXXXXXXXXQSNDVEMEEAGEEKEVGASHSDGEIEQEEEEQKEE
TEVKVEQGAEVKENREQDNQHESVVLLKEEGENSLPVDGEQDVVEAETDNAEPLENENSK
EIEPEMECSAPPDQECPVISLEKEEVSKPEADAEPEETEEKEHESTPVEEAEAQLQPESV
LWPQPPQLFESTQDQDPQVIKEETAVPEKLPETQADQVQTGSAEVKHKIRSRSRGRARNK
TSKSRSRSTSSSTSSTSSTSSSSGSSSSSGSSSSRSSSSSSSTTSGSSSRESSSSSSSSE
SRSRSRGRGHNRDRKRRRSLDRKRRENAGVDRSHKSSKGSSRDAKGSKDKISRSDRKRSI
SESSRSGKRTSRSERDRKSDRKDKRR
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagctgtgcgtgctctgcaggagcagcttgagaaggccaaagagagcctcaag
cacgtcgatgagaacatccgcaagctcacggggagggaccccaacgatgtgcggccagct
caaggtagattgttgaccctcacaggccctggtggaggtagggggcgtggaagtatattg
ctgaggcgtggattctcggatagcggaggaggacccccagccaaacagagggatttggaa
ggggcgaccagtaggctggctggggagcgtcggacaaggagagaatcacgccatgaaagc
gacgcagaggatgatgatgttaaaaaaccagcgttgcagtcttctgttgttgctacctcc
aaagagcgaacacgccgagacctcattcaagatcaaaacatggatgaaaaagggaaacaa
aggaatcggcgtatatttggcctgttgatgggtactcttcagaagttcaaacaagaatct
acagttgctactgagaggcaaaaaaggcgacaagaaattgaacagaaacttgaagtgcaa
gcagaagaagagagaaagcaagttgaaaatgagaggcgagaactttttgaagaaagacgt
gctaaacaaacagagctgcggcttttagaacaaaaagttgaacttgctcagttgcaagag
gattggaatgaacataatgccaaaataattaaatacataagaacaaggacaaagcctcac
ctgttcttcatccctggcaaaatgtgtgctgccacacagaagcagtttgatgactctcag
aaaaagttaaacgcactgtttgaaagtaggcgcattgaatttgcagagcaaattaacaaa
atggaagccaggcccaggcgacaatctgtgaaggaaaaagaacatcaggaggtgcagaag
gaagaaaagaaggaagaccagaacaaggagcaggaagagggtnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnncagagcaatgatgtagagatggaagaggcaggggaggaaaaggag
gtaggtgctagtcatagtgatggggagatagagcaggaagaggaagaacagaaagaggaa
acagaggttaaagtagaacagggagctgaagttaaagagaacagggagcaggataatcag
catgagagtgttgtgttgttgaaagaggaaggtgaaaacagtctcccggtagatggtgag
caggatgtggtggaagctgagacagataatgcagaaccactagaaaatgaaaatagcaaa
gagattgaaccagaaatggagtgtagcgctccaccagaccaggagtgtcctgttatttcc
ctggagaaagaggaagtcagcaagccagaagctgatgctgaaccagaggagacagaagaa
aaggaacatgaatccactccagtggaggaggctgaggcccagcttcagccagagtctgtg
ctttggccacagcctccacagttatttgaatccactcaagatcaagatcctcaggtaatc
aaagaagaaactgcagtacctgagaagctgcctgagactcaggcagaccaggtgcagaca
ggaagcgcagaagtcaagcacaagattaggagcaggagtagaggcagagcaaggaacaaa
actagcaagagtcgaagtcggagcaccagcagtagcaccagtagtactagctctacaagt
agtagtagcggcagcagttctagcagtggcagcagtagcagtcggagcagctccagcagc
agcagcaccactagtggcagtagcagtcgagaaagcagcagtagttctagtagcagtgag
agcaggagtcggagcagagggcgtgggcataatagggataggaagcggaggaggagtttg
gatcggaagcgaagggagaatgcaggagtagatagaagtcacaaatcttcaaaaggtagc
agcagagatgcaaaaggatcaaaggataaaatctcaaggtccgacaggaagaggtctata
tcagaaagtagtcggtcaggcaaaagaacttcacggagtgaaagagaccgtaaatcagac
aggaaagacaaaaggcgttga
DBGET
integrated database retrieval system
