KEGG   Gekko japonicus (Schlegel's Japanese gecko): 107123208
Entry
107123208         CDS       T04299                                 
Symbol
DDB2
Name
(RefSeq) damage specific DNA binding protein 2
  KO
K10140  DNA damage-binding protein 2
Organism
gja  Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03420  Nucleotide excision repair
gja04115  p53 signaling pathway
gja04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:gja00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    107123208 (DDB2)
  09124 Replication and repair
   03420 Nucleotide excision repair
    107123208 (DDB2)
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    107123208 (DDB2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gja04121]
    107123208 (DDB2)
   03400 DNA repair and recombination proteins [BR:gja03400]
    107123208 (DDB2)
Ubiquitin system [BR:gja04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     107123208 (DDB2)
DNA repair and recombination proteins [BR:gja03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      107123208 (DDB2)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 WD40 Beta-prop_WDR5 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML_2 WDR55 Beta-prop_EML Beta-prop_Aladin Beta-prop_WDR36-Utp21_1st Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WD40_RFWD3 ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_TEP1_2nd Beta-prop_WDR35_TULP_N Beta-prop_Vps41
Other DBs
NCBI-GeneID: 107123208
NCBI-ProteinID: XP_015281890
UniProt: A0ABM1L7F3
LinkDB
Position
Un
AA seq 509 aa
MPSEKQSKNKKWLKTFENPSEKEAKSTGKRKRDQVELENELRTKKLLVRKINKFPEKTGQ
TFHASIIRNTGVPFHQREMQKSIVHYVYQNVLGSSVGVQLKKQCLQMHFIRSLKQYRLFR
TASPFDRRVTCLEWHPAHPSTVAVGSKGGDIILWDYEVLNKTCLIKGMGAGGSITGMKFN
PFNPSELYTSSVAGTTVLQDFNGNTIRVFTSTDDWDFWYCSVDVSANCRAVVTGDNMGNV
VLLSTEGEKIWNLKLHKRKVTHVEFNPSCDWLLATASVDQTVKIWDLRNIKDKSCYLHAL
PHDKAVNAAYFSPTDGSKLLTTDQHSEIRVYSSFDWSKPQHLIPHPHRQFQHLTPIKATW
HPRYNLIVAGRYPDPKFPGYTVDELRTVDIFDGDSGEMVCQLYDPNASGIISLSKFNPMG
DTLASGMGFNILIWSREEMVTRKQECLMQAMTEQGIGGRSLSRQRGQRQSSTGTSRLRTK
LLSLDFEGSKTKSKECTLQKKRKGKDSED
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgccctcagagaagcagtcaaagaacaagaaatggttgaaaacatttgagaatccttca
gaaaaggaggcaaaatcaactgggaaaaggaaacgagatcaggtggaactggaaaatgag
ttgcgaacaaagaaattgcttgtcagaaaaatcaacaagtttccagagaaaacgggtcaa
actttccatgcctccataatcagaaatactggagtgccttttcatcagcgagagatgcag
aagagcattgtccattatgtctaccagaatgtgctgggttcctctgttggggtacagctc
aagaagcagtgtctccagatgcattttatacgttccctcaagcaataccgcttgttcaga
actgcaagtccctttgataggagagttacatgtttggagtggcatccagcgcatcccagc
acagttgctgtgggctccaaaggtggagatatcatcctgtgggactatgaagtgctcaat
aaaacctgcctcataaaagggatgggagctggagggtccatcacaggaatgaagtttaac
ccttttaatcctagtgagctgtacacatcatcagttgctggaactactgtcctccaggat
tttaatgggaatacaatccgggtcttcaccagtaccgacgactgggatttctggtactgc
agtgtagatgtatctgcaaattgccgggctgtggtgacaggtgataatatgggcaacgtc
gtcctactcagtacagagggtgaaaagatatggaacctgaaactgcacaaaaggaaagta
actcatgtggagtttaatcctagctgtgattggcttttggctacagcctctgtagatcaa
actgtcaaaatctgggatctgaggaacataaaagacaagtcatgttaccttcatgcactt
cctcatgacaaagctgtcaatgcagcttatttcagcccaacagatggttctaagctactg
actactgaccagcacagtgaaatccgggtttattcctcttttgattggtccaaaccacag
catctgattccacatcctcatcggcaatttcagcatctcacacctattaaggcaacatgg
catcctcgttataacctcattgtagctggtcgttatccagatcctaagttcccaggatac
acagtagatgagctgcgaactgtcgatatatttgatggagacagtggggaaatggtgtgc
cagctgtatgatccaaatgcatctggcattatttcgctcagtaagtttaaccctatggga
gacacacttgcctctggaatgggttttaatattctgatctggagccgggaggaaatggta
accagaaaacaagagtgtctcatgcaagctatgacagagcagggaattggaggcaggagt
ttatctcggcaaagaggacagaggcaatcaagcactggaacaagtagactcagaactaaa
ctactcagtctggattttgagggaagcaaaacaaagagcaaggaatgcacattacagaag
aaacggaaaggaaaggattcagaggactga

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