Gekko japonicus (Schlegel's Japanese gecko): 107123572
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Entry
107123572 CDS
T04299
Symbol
VPS8
Name
(RefSeq) VPS8, CORVET complex subunit
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107123572 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gja04131
]
107123572 (VPS8)
Membrane trafficking [BR:
gja04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
107123572 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
zf_RING_Vps8
zf-RING_Vps41
TPR_VPS8_2
Clathrin
WD40_CDC20-Fz
TPR_Vps41
zf-RING_11
zf_RING_Vps8_fungal
zf-RING_2
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
107123572
NCBI-ProteinID:
XP_015282305
LinkDB
All DBs
Position
Un
AA seq
1426 aa
AA seq
DB search
MDSDFLRKPLEVGKGEMEEEMKMESQNLDPDQGSCSLTDELSQQLLSQEAPSPKLSVIEL
SKELDSKSDLIDDKEFDIPQVDTPPTLESILNETDDEEEPFVLEDPCLLNVDNIDTHSYD
TSSVASSDSGDRTHLKRKKKLHDSFSIHGSVIRLSLLKGISAQIASAAAKVDAGTPTAIA
ASSLIAVGTSHGLALIFDPNQALRLCLGSTAVGAQYGAISALSINNDCSRLLCGFAKGEI
TMWDLASGKLLRSITDAHPPGTAILHIKFTDDPTLAICNDSGGSVFELSFKRVMGVRTCE
SRCLFSGSKGEVCCIEPLHAKTELRDHPITQYSLLAMASLTKILVIGLKPSLKVWMTFPY
GRMDPSSVPLLAWHFVAVQTSVNPVLAFCRGDVVHFLLVKRDESGAIHVTKQKQLHLHYD
LINFTWINSRTVVLLDSVEKLHVIDRQTQEELETVEISEVQLVYNSSHFKSLATGGNVSQ
ALALVGEKACYQSISNCGGQIFYLGTKSVHVMTLRSWRERIDHLLKQECLNEALALAWSF
HEGKAKAVVGLSGDEQKRKAVVTDRMVEILIHYADRTMKKCPDQGKIQVMEQYFQDMVPV
IVDYCLLLQRMDLLFSQMYDKMSENSVAKGVFLECLEPYILSDKLVGITAQIMKDLLLHF
QDRNLMANMEACIVHMDITSLDIQQVVLMCWENHLYDAMIYVYNSGMNDFITPMEKLFKV
IAPPLAAGKSLSDEQVIMGNKLLVYISCSLAGRAYPLGNIPEDLVPLVKNQVFEFLIRLH
SAEASVDEEVYPYVRTLLHFDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVEN
SDFTPSQVGCLFTFLARQLAKPNNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELL
HAGGIVQFEESRLIQMAEKAEFYQICEFMYEREHCYDKIIDCYLRDPLRKEEVFGYVHNI
LSIPGYSTEEKQSVWQKAMKHIEELLSVSPSKAADMISVHFSDQIEQIIQTLQDQHLLFQ
FLKNLLDPREGVNQDLLQLSPSVTEQFIELLCQYEPDQVLETLQFLEVYRLEETIQVVQK
YQLHEASSYLLEKKGDIHGAFLVMLEWLQSKLLTLTNDNEKSTECPSLKNIELTLVKTIA
LCQRNSHNLNQQQREALWFPLLEAMMSPQRLSNSTGLCLYSDFLKNLTMQVLNNMASFIA
LPSILQRILQDPVYGRGKLGEIQGLVLGMLDSFNYEQTLLETTTNLLNRDLHWSLCNLRA
SMARGLNPKQDYCCICLQQYKRRQESADQIIVFSCGHLYHSLCLLSKGCGIDSKGQMRWT
CFKCNASNRSGKLSETSSEIKKGTTVSLPQTSSESLLDPQQAQAFDQLCRLYRGTSRLAL
LTELSRDRGGEKHGLLQVSQGDPALNSVFQNETFQLHLTPPPVLDE
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
atggattctgattttttgaggaagcccctggaggtggggaaaggagagatggaagaggaa
atgaagatggagagtcaaaaccttgatccagaccaggggtcttgctctctgacagatgaa
ttaagtcagcagctcttgagccaagaagccccttctccaaagctgtctgtgattgaactg
agcaaggagctagactccaagagtgatttgatcgatgacaaggagtttgatattccccag
gttgatactcctccaacactggaaagtattttaaatgagacagatgatgaagaagagcct
tttgttcttgaagatccttgtcttctgaatgttgacaatattgacacccactcatatgat
acctcttctgttgctagctccgacagtggggataggacccacttgaaaaggaagaagaag
cttcatgattctttctctatccatggctcagttatacggctgtcacttttgaaaggcatt
tctgcacaaatagcatctgcggcagccaaagtggatgctggcacacccactgcaatagca
gcatcaagtctcatagcagtgggaacatctcatgggctagcactgatatttgatcccaac
caggctcttcggctttgtttgggcagtactgcagttggagcacagtatggagccatatct
gctcttagtatcaacaatgattgttcaagacttctgtgtggttttgcaaaaggagagatt
acgatgtgggacctagccagtgggaagcttttgagatcaataacagatgctcatcctcca
ggaacggcaatattacacattaagtttacagatgacccaactcttgcaatttgcaacgac
agtggaggttcagtttttgagctgtcattcaagagagttatgggggtgcgaacatgtgag
tcacgctgtttgttcagtggttccaaaggagaagtttgctgcattgagccattgcatgca
aagactgaactgagagaccatcctattacccaatactctctgctggcaatggcttcctta
accaagattcttgtcatcggattgaaaccatctttgaaggtgtggatgacttttccgtat
ggtcgcatggacccatccagtgttccactgctggcttggcattttgttgcagtgcagaca
tctgtgaatcctgtgcttgctttctgtcgaggagatgttgttcactttcttctagtaaag
agagatgaatctggagcaattcatgttacaaagcagaagcagctgcacctgcattatgat
cttatcaattttacttggataaattctcgcacagtcgtacttctggatagtgtggaaaag
ctgcatgtgatagatcgtcagacacaggaggagcttgagactgtggagatttcagaggtt
cagttagtttacaacagcagccacttcaaatcactggcaacaggaggcaatgtcagccaa
gcactggcattggtgggggagaaggcttgctaccagtccatcagcaactgtggtggtcag
atcttttatttaggtacaaagtctgtgcatgtgatgacactgaggagctggagagaacga
atagatcatcttctgaaacaagaatgccttaatgaagctttggcacttgcttggtccttt
catgaagggaaagcaaaggctgttgtaggtttgtctggagatgagcagaaacgaaaggct
gttgtcactgacagaatggttgaaatccttattcattatgctgatcgaactatgaagaaa
tgtcctgaccagggtaaaatccaagtgatggaacagtacttccaggatatggtgcctgtc
attgttgactactgccttctgcttcagcgaatggatctgttgtttagtcagatgtatgac
aagatgagtgaaaattctgtggcaaaaggtgtctttctggaatgtcttgagccgtacatt
ttgagtgataaattggtgggaatcacagctcaaattatgaaagatctgctgcttcacttc
caagatagaaatttaatggcaaacatggaggcttgcattgtacatatggacatcaccagc
ctagacatacagcaggttgtcctcatgtgttgggaaaatcacctttatgatgccatgatc
tatgtctataacagtggaatgaatgattttattactcccatggagaaattattcaaggtc
attgctcctccccttgctgctggcaagtctctctcagatgagcaggtgattatgggcaac
aagcttcttgtttatatcagttgcagtttggcaggtcgagcttatccactgggcaatatt
cctgaagatctggtgcccttggttaaaaaccaggtctttgaatttcttatccgtttgcac
tcagctgaagcatcagtagatgaagaagtttacccctatgtacgtacgctgttacacttc
gatactcgggagtttttgaatgtgcttgcattgacatttgaggactttaagaatgacaag
caagctgtggagtatcaacaaagaattgttgacatccttctcaaggttatggtagagaac
tctgattttacaccttcacaagttggatgcctctttactttccttgcccggcagcttgct
aagcccaacaacacactgtttgtgaacaggacactatttgaccaggtcctcgaattcctc
tgcagtcctgatgatgattcacgacactccgaaagacagcaggttcttctagaattgctc
catgctggaggcatagtacagtttgaagagagcagactcattcaaatggcagagaaagct
gaattctaccaaatttgtgaatttatgtatgaacgtgaacactgctatgacaaaatcatt
gattgttatttgcgtgatccattgagaaaggaagaagtttttggctatgtccataatata
ctctccattcctgggtatagtacagaagagaaacagtctgtgtggcaaaaagctatgaaa
cacattgaggagctgctatcagtgagtccctctaaagcagcagatatgatttctgtccac
ttcagtgaccaaattgaacaaatcattcagaccttgcaggatcaacatttgctttttcag
ttcttgaagaacctacttgacccaagggaaggtgtcaatcaagacttgcttcagctctct
ccctctgttactgaacagtttattgaattgctgtgtcagtatgagcctgaccaggtttta
gagactttacagttcctggaggtctacaggctggaagagacaattcaggttgtccagaaa
tatcagctgcacgaagcttcttcctatctgcttgagaagaaaggagatattcatggtgcc
ttcttagttatgcttgagtggctacagagtaagctgttgacacttacaaatgacaatgaa
aaatcaacagaatgtccttccttaaagaatattgaacttaccttagtgaaaacaattgcg
ctttgccagaggaattcgcacaatttaaatcaacagcagcgagaggcgctgtggtttcca
ctgctagaagccatgatgtccccacaaaggttatctaattctactgggctatgcctttat
tctgactttttgaagaacctgacgatgcaagtgctgaacaacatggcatctttcattgcc
ctaccatcgatcttgcagagaattctacaggatccagtctatggtagaggaaaacttgga
gaaattcagggtcttgtgttgggcatgctggatagctttaactatgagcaaactcttctt
gagaccacaactaacctactcaaccgtgacctccactggtctttatgtaatctgagagca
tctatggctagaggtctcaaccccaagcaagattactgctgtatttgtcttcaacaatat
aaaagacgacaagagagtgctgaccaaatcattgtcttcagctgtggtcacttgtaccac
tctctctgtctcctgagtaagggatgtggcattgactcaaagggacagatgagatggact
tgttttaaatgcaatgcaagtaacagaagtggtaaactcagtgagacttcctcagagatt
aagaaagggaccacagtatctctgccacagactagttcagagtccctgttggatccccag
caagcacaagcttttgaccagctctgtcgtctatatcgagggacatcgaggttggctctt
ctgactgaactctctcgagatcgtggtggcgaaaaacacggactcctccaggtctcccag
ggtgatcctgctctgaacagtgtcttccagaatgagactttccagcttcacctcactcct
cctcccgttctggatgagtaa
DBGET
integrated database retrieval system
