Gekko japonicus (Schlegel's Japanese gecko): 107123602
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Entry
107123602 CDS
T04299
Symbol
ATG16L1
Name
(RefSeq) autophagy related 16 like 1
KO
K17890
autophagy-related protein 16-1
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja04136
Autophagy - other
gja04140
Autophagy - animal
gja04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107123602 (ATG16L1)
04136 Autophagy - other
107123602 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
107123602 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gja04131
]
107123602 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
gja03029
]
107123602 (ATG16L1)
Membrane trafficking [BR:
gja04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
107123602 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
107123602 (ATG16L1)
Mitochondrial biogenesis [BR:
gja03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
107123602 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG16
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_EIPR1
WD40_RFWD3
ANAPC4_WD40
eIF2A
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Ge1_WD40
Beta-prop_WDR19_1st
Beta-prop_HPS5
PUMA_CC
CCDC93_CC
Fez1
Vma22_CCDC115
WD40_like
INO80F
HTH_6
DUF6383
Phostensin_N
Beta-prop_WDR19_2nd
AP5B1_middle
DUF2332
IL31
YabA
Motif
Other DBs
NCBI-GeneID:
107123602
NCBI-ProteinID:
XP_015282345
LinkDB
All DBs
Position
Un
AA seq
623 aa
AA seq
DB search
MSSGLRTASFPAWKRHILDELRRRDRLQRQAFEEIILQYNKLLEKSDLHTVLADKLQAEK
YDLPSRHEISPGHDGTRNDVHLQEIAQLRIKHQEELTELHKKRGELAQSVIDLNNQIQQK
DREMQINEAKIAEYLQKISELETECQELRNMLQDLERANQTLKDEYDALQITFTALEEKL
RKTTEDNQELVTRWMAEKAQEANRLNAENEKDSRRRQAKLQKELAEAAKEPLPVEQDDDI
EVLADETSDAAEDTSPVRAVSRTASKRLSQPAGGLLDSITNIFGLSESPLLGHHSSDAAR
RRSQSSISVPQDNVDKHPGASKDVRVPTTAVCVFVAHDGEVNAVQFSPGSRLLATGGLDR
RVKLWEVFGDKCEYKGSLSGSNAGITSIEFDSAGSYLLASSNDFASRIWTVDDNRLRHTL
TGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTIFAGSSCNDLVCTEQCVMS
GHFDKKIRFWDIRTESTVLEMELLGRITALDLNPERTELLSCSRDDLLKIIDLRVNAVKQ
TFGAQGFKCGSDWTRVVFSPDGNYVVAGSADGSLYIWNVLTGKVEKVLSKHHSNSINAVA
WSPSGVHVVSVDKGNKAVLWSDF
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgggctcaggacagcgagtttccccgcctggaagcgccacatcctggacgag
ctgaggcgacgggatcggctccagagacaggcctttgaagagatcatcttgcagtataac
aaattgctggagaagtcagatctccatacagtgctggctgacaagctacaagcagaaaaa
tatgacttgccaagccggcatgagatcagtccaggacatgatggtacaaggaatgatgtt
cacttgcaagaaatagcccagctaagaattaaacatcaagaggaattgacagagctacac
aagaaacgtggcgagttggcccaatctgtgattgatctgaacaaccaaatacaacagaag
gacagagaaatgcaaatcaatgaagcaaagattgcagaatatctgcaaaagatatcggag
ctagaaacagagtgccaggaactgcgcaacatgctgcaagatcttgaacgagccaatcag
actcttaaggatgagtatgatgctctgcagatcaccttcacagcgctagaagagaaatta
agaaaaacaactgaagataaccaagaactggtgactcgttggatggcagagaaggctcag
gaagctaatcgtctcaatgcagaaaatgagaaagactcaagaaggcgacaggccaaactt
cagaaagaactagcggaagctgccaaggaaccactgccagtcgaacaggatgatgatatt
gaagtgcttgcagatgaaacctcagatgcagctgaggatacatctccagtgcgtgctgtc
agtcggacagccagtaagcgactttcccagccagctggaggccttctggactctatcact
aatatctttggtctgtctgagtctccccttttgggacatcactcttctgatgccgccagg
aggcgctctcagtcctcaatttccgtcccccaagataatgttgataaacatccgggtgca
agcaaagatgtgcgagtccctactactgcagtgtgtgtttttgtcgctcacgatggggaa
gtgaacgcagtccagtttagccctggctctcggttactggcaacaggtggcttggaccgg
agggtaaaactctgggaagtctttggagacaagtgtgaatataaaggttccctgtctggc
agtaatgcgggtattacaagcatagagtttgatagtgctggttcttacctattagcatct
tcgaatgactttgccagtaggatctggactgtagatgataatcggttacggcacactctc
acagggcacagtggaaaagtcttgtcagccaaatttctgctggacaatgcacgcattgtg
tcggggagccacgacagaaccctcaagctgtgggacctacgcagcaaagtctgtataaag
actatatttgcaggctccagctgcaatgatctggtctgcacagaacaatgtgtgatgagt
ggacactttgacaagaaaattcgcttttgggatattagaactgagagcacagtactagaa
atggaactgcttggtaggattacagctctagatctcaacccagaaagaacggagctcctc
tcctgttctcgagatgatttgttgaagattattgatcttcgtgtcaatgctgttaagcag
acttttggtgcccaaggttttaaatgtgggtctgactggaccagagttgtattcagccct
gatggcaattatgtggtggctggctcagcagatgggtccctttatatttggaatgtgctc
actggaaaagtggagaaggtgctctccaagcatcacagcaactctatcaatgccgtggca
tggtcaccatcgggagtccatgtggtcagtgtggataaaggaaacaaggctgtcctgtgg
tctgacttttga
DBGET
integrated database retrieval system
