Gekko japonicus (Schlegel's Japanese gecko): 107124258
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Entry
107124258 CDS
T04299
Symbol
MSH2
Name
(RefSeq) mutS homolog 2
KO
K08735
DNA mismatch repair protein MSH2
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
107124258 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gja03400
]
107124258 (MSH2)
DNA repair and recombination proteins [BR:
gja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
107124258 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_I
MutS_IV
AAA_27
MCU
T3SS_needle_reg
Motif
Other DBs
NCBI-GeneID:
107124258
NCBI-ProteinID:
XP_015283162
LinkDB
All DBs
Position
Un
AA seq
933 aa
AA seq
DB search
MAASADPSQRDGGSASDAGFVRAVLALPTKPDTTVRFFERGDYYTVHGEDAALAAKELFR
TREVIRILGTGAQKLESVSLSKMNFESFLRDLLLVRQYRVEVYKNKAGSKSSKENEWRLA
YKGSPGNLAQFEDILFGNHDMSSSVGVMGIKLFQADGQKVVGVGFVDSLERKLEVCEFPD
NDQFSNLEALLVQIGPKECVLPVGETAGDMGKLRQVIQRGGIMITDRKKSEFSTKDIVQD
LNRLLRMKKKQQISSAALPEMDKPVAISSLSAVIKYLELLNDESNFGQFELGTFDLSQYM
TLDHAAVRALNLFQNSSENALGTQSLVGLLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL
NLVEAFVDDAELRQSLQEDHLRRFPDFNRLAKKFQRKSATLQDCYKMYQAVNQIPNVVKA
LEKNEGKHDTLLQAVFMSPLNELFSDFSKFQQMIETTLDMDKVEIHEYLVKPSFDPNLST
LREKMNELEEKMQEVLKTAARELSLEPGKSIKLECNAQYGHFFRITYREEKVLRNNLKYS
VLETQKNGVKFSNSKLKELKEEYAKNRGEYEEAQDVIVKEIINIASGYKDPIQFLSEVIA
QLDAVVSFAHASNVAPVPYVRPEILEMGERRIILKGSRHPCIEVQDDVAFIPNDVTFEGD
SQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCDSAEVSIVDSILARVGAGDSQLK
GVSTFMAEMLETSSILRSATENSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF
ATHFHELTALADQVPSVNNLHVTALTTEDSLTMLYRVKKGFCDQSFGIHVAELAAFPQHV
IENAKAKALELEEFQHTGKPQEADEEPAAKRCYEEKQEGEKIIQDFLSKVNAMPLKNMSE
EQIRVKLKQLKEDILAKNNSFVNEIISRATVRS
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctccgcggatccttctcagcgtgacggcgggtcagcctcagacgccgggttc
gtgcgcgcggtgttggcgctgcccactaaacccgacaccacagtgcgtttctttgagcga
ggcgattactacacggtgcatggcgaagatgccgcgctggcggccaaggagcttttccgg
acgcgggaagttattcgaatcctgggcacaggagcccagaaacttgaaagtgtttcgctt
agcaagatgaactttgagtcttttttgagggatctacttctagttcgtcaatacagggta
gaagtgtacaagaacaaagcaggaagtaaatcctctaaagagaatgagtggcgcttggca
tacaagggctctccaggaaaccttgcccagtttgaggatattctgtttggtaaccatgac
atgtcttcttctgttggtgttatgggtatcaagctcttccaagctgatggacaaaaagtt
gttggagttgggtttgtagattctttggagagaaaactggaagtgtgtgagttccctgat
aatgatcagttttcaaaccttgaagctctgctagttcagattggacccaaagaatgtgtt
ctccctgtgggagagactgctggagatatgggaaaactgagacaggtcattcaaagagga
ggaattatgatcacagacaggaaaaagagtgaattttcaacaaaagatattgtgcaagat
ctcaatcgcttgctgaggatgaaaaagaaacagcagatatccagtgcagcactacctgaa
atggacaaacctgttgccatctcttctttgtctgcagtgatcaagtatttagaacttcta
aatgatgagtctaattttgggcaatttgaactcggcaccttcgacctcagtcagtacatg
acactggatcatgctgctgtcagagctcttaatcttttccagaattcttcagaaaatgcc
cttggcacacagtctctggtaggactgttgaataagtgcaaaacccctcaaggacagagg
cttgtgaaccagtggatcaaacagcctctgatggacaagaacagaatagaggaaaggcta
aatttggtggaggcctttgtggatgatgcggaactacggcagtctcttcaagaggaccac
ctccgtcgcttcccagacttcaatcggctggcaaaaaaatttcagaggaaatcagccact
ctgcaggactgttacaagatgtaccaggctgttaatcagattcctaatgtggtgaaagca
ctggagaaaaatgaaggaaagcatgatacgctattgcaagcagtgttcatgtctcctctt
aatgagttgttctccgatttctccaagtttcaacagatgatcgaaacaactttagacatg
gataaggtggaaatccatgaatatcttgtgaaaccttcctttgatcccaatctgtctaca
ttgagagaaaagatgaatgagctagaggaaaaaatgcaggaggtgctgaagacagctgcc
agggagctaagtttggaacctggcaagagcatcaaattggaatgcaatgcacaatatggg
cattttttccggattacctacagggaggagaaagtactgaggaacaatctgaaatacagt
gtcttggaaacccagaagaatggtgtgaagttctccaacagtaaattgaaagagctcaag
gaagaatacgcaaagaacagaggagaatatgaagaagctcaggatgttattgttaaagaa
attataaacattgcatcaggatacaaggaccccatacagtttctgagtgaagtcatagcc
cagctggatgcagttgtcagttttgctcatgcgtcgaatgtcgcacctgtgccctatgta
cgcccagagattctggaaatgggagaaaggaggattatactgaaaggctcaagacacccc
tgtatcgaagttcaagatgatgttgccttcattccaaatgatgtgacctttgagggcgac
agtcagatgttccacatcattactggaccgaacatgggagggaaatcaacctacattcgc
cagaccggtgtgatagttcttatggctcaaattgggtgttttgtgccctgtgactctgca
gaggtgtctattgtcgatagtatactggctcgagtaggagctggagacagtcagctgaag
ggggtgtctaccttcatggcagaaatgctggaaacatcttccatccttaggtctgctaca
gaaaactcattgataatcatcgatgaactgggaagaggaacttctacatatgatggcttt
gggttggcatgggctatctcagaatatattgccaccaaaattggagctttctgtatgttt
gcaactcatttccatgaattgacagctcttgctgaccaggttccctctgtgaataacttg
catgtcacagcgctgaccactgaggactccctgacgatgttgtaccgtgtgaaaaaaggg
ttttgtgaccagagttttggaatccacgtagcagagcttgctgcctttccacaacatgtg
atagagaatgcaaaggcaaaagctctggaattagaggagttccagcatactggaaagccc
caggaggcggatgaagaaccagcagccaaaagatgctacgaagaaaagcaggaaggtgaa
aaaataatccaggattttctttcgaaagtgaatgcaatgccactgaaaaacatgtctgag
gaacaaatcagagtcaagctgaagcagctcaaagaggacatcttggcaaagaacaacagc
tttgtgaatgaaatcatttcccgagctacagttcgttcatga
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