Gekko japonicus (Schlegel's Japanese gecko): 107124261
Help
Entry
107124261 CDS
T04299
Symbol
MSH6
Name
(RefSeq) mutS homolog 6
KO
K08737
DNA mismatch repair protein MSH6
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
107124261 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gja03400
]
107124261 (MSH6)
DNA repair and recombination proteins [BR:
gja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
107124261 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
PWWP
MutS_II
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
107124261
NCBI-ProteinID:
XP_015283165
LinkDB
All DBs
Position
Un
AA seq
1349 aa
AA seq
DB search
MSRQSSLLNFFPKASAEHTSPPPTEKDMDDGGGGGGGGRSSPNPGSAGAKPRSSARGRRS
MLEPVPVPVAESVLSELTPGDLVWAKLEGYPWWPCLVYNHPTEGAFVRGRGRSARIHVQF
FDDEPSRGWVGVKYIKTYTGSTGRETQRGGMFYSPKPEIKRAMELADIALGKDKTERLDL
AVCDKPSESEEEEEDEMEQVSDEGEDFDTAGEGRRTKRPAGKQQHAGKAKRRRVIMESDS
DNEGSDMEFKPEEVSSDEVSIGGGDSEAESQADPKKKAENSVKAHNKHTQEKISKPPQKE
TFKNDLPLAPKRDSLSFEIKNKLTSFAAPECFEFHPSLNGGGGRGDDTNPTVWEHDKLDW
LQDDKKKDIRRRKKNDPDYDPGTLFVPEDYLKNCTPGMRKWWEMKSQNFDCVIFYKVGKF
YELYHMDAVVGVKELGLVFMKGTWAHSGFPEIAFDRFSNVLVQKGYKVIRVEQMETPEMM
EARCKSLVHPTKFDRVVRREICRIITKGTQTYSILEGDFSEDQNKYLLCVKEKVVDSAGL
HRIYGVCFVDTTVGKFYVGQFLDDRHCSRFRTLLAHYTPVQILFERGNPSAETQKIFKGL
LSSTVQEGLAPGSQFWNAAKTLKTLVEEGYFEGQENASGRLVLPPVIRSMTAESDSLGLT
PAEDRELVLCALGSCVFYLKKCVIDQELLSMANFEEYVPVDVHTSKTTESSSFFAKTSQR
MVLDGVTLTNLEILQNATTGSLEGSLLEKLDMCCTPFGRRLLKQWLCAPLCNPAAINDRL
DAVEDLLAEAAKMSEIRDLLKKLPDLEKLLGKIHSIGSSLNIQNHPNNRAILYEEMRYSK
KKIVDFLSTLEGFKIILEIISILEDIGDGFTSKTLKQIVTVKSKNPTGCFPDLKAELERW
DTSFDHNVARRTGVINPKAGFDSDYDKALEDIKDVEERLRQYMEKQRKRLGCKAMMYWGA
GKNRYQMEIAESALPNNLPDEYVLRSSRKGYKRYWTKDIEKMLTEIVSAEERRDAAQKDC
MKRLFYNFDKNSKDWRMAVECIAVLDVLLCLAQYSQGCDGPLCRPVFLLPEKNTPPFLEL
RSSRHPCITKTLFGDDFIPNDILIGVEGEKSDSWTDARCVLVTGPNMGGKSTLMRQAGLL
VIMAQLGFFVPAESCRLTPVDRVFTRLGASDRILSGESTFFVELSETSSILQHATEHSFV
LMDELGRGTATFDGTAIASAVVKELSENIKCRTMFSTHYHSLVEDYFHSPSVQLGHMACM
VENETDDPSQETITFLYKFIKGACPKSYGFNAARLADIPEEIIQKGHKKARDFEKSVLSL
KLFRNLCLIAEGAPPAVDDLHKLVTLLYE
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccagagctctctcctcaatttcttccccaaggcctctgccgagcacacgagc
cccccgccgacggagaaggacatggacgatggcggcggcggcggcggcggcggcaggagc
tcgcccaacccaggctccgctggggcgaaacctcgaagtagcgcccggggccgacggagt
atgttggaaccagttccagttcctgttgccgagagtgtcctcagtgaacttacacctggt
gatttggtttgggccaaactcgaaggttacccttggtggccatgcctcgtgtacaatcat
ccaacagaaggggcatttgtcagagggagaggaagatcagctcgcatccatgtacagttt
tttgatgatgagccatcgagaggctgggttggtgttaaatacataaaaacatatacaggt
tctactggccgggaaacgcagaggggaggtatgttttacagcccaaagcctgaaattaaa
agagcaatggaactggcggacattgctttgggaaaagataaaaccgagcgacttgatttg
gctgtatgtgacaaaccttcagaaagtgaggaggaagaggaagatgagatggagcaggtg
agtgatgagggtgaagattttgacacagcaggggaagggagaagaactaaaaggccagct
ggaaagcagcaacatgctggaaaagccaaaaggaggagagtgatcatggagtcagatagt
gacaatgaaggttcagacatggagtttaagccagaagaagtcagcagcgatgaagtcagc
atcggagggggtgacagtgaggctgaatctcaggctgatccaaaaaagaaagcagaaaat
tctgttaaagcccataataaacatacccaggaaaagataagcaaacctcctcaaaaggaa
acctttaaaaatgaccttcctctagcccccaaaagagacagtctttcttttgagatcaag
aataagctaacatcttttgcagctcctgaatgctttgagtttcatccaagcctcaatgga
ggaggaggaaggggggatgataccaacccaactgtatgggaacatgataaacttgattgg
ctccaagatgataaaaaaaaagatatccgtaggagaaagaaaaatgatccagattatgat
ccgggtacactgtttgtgccagaagactatctaaaaaactgtactccaggaatgcggaag
tggtgggagatgaagagtcagaattttgactgtgtgatattctacaaagttggaaagttt
tatgagttgtatcacatggatgctgttgttggggttaaagagctgggactggtgttcatg
aagggcacttgggctcattcaggcttcccagaaatagcttttgacagattttccaatgtc
ttagtccagaaaggttataaagttatccgtgttgagcagatggagacgccggaaatgatg
gaagcacgttgcaaatctttagttcatccgacaaaatttgacagggttgtgcgaagagaa
atatgcaggatcattaccaaagggacgcaaacctacagtattctggaaggtgacttttcg
gaggaccaaaacaaataccttctgtgtgtaaaagaaaaagttgttgattctgctggtctc
catcgtatttacggggtgtgttttgttgatacaacagtcggcaagttctatgtgggtcag
ttcctggatgatcgccattgctcaaggtttagaactctcttggctcattatactcctgtg
cagatcctgtttgagagaggaaacccctctgcagaaacacaaaagatattcaagggctta
ctgtcttctactgtgcaagaaggcttggctcctggttctcagttctggaatgcagccaaa
acattaaaaactctggttgaggaaggctactttgagggccaggaaaatgccagtggtaga
cttgttctgcctccagtaatcagatccatgactgcggaaagtgactcacttggacttact
ccagcggaagaccgcgagttagttctgtgtgctcttggtagctgtgtcttctaccttaag
aaatgtgttattgaccaggagctattatcaatggcaaactttgaagaatatgttcctgtg
gatgttcacacttcaaaaacaactgaatcaagtagtttctttgccaaaactagtcagagg
atggtgctggatggggtgactctaacaaacctggaaatactgcagaatgcaaccactggt
tcactagaaggttcactgctggaaaagcttgatatgtgttgtactccatttgggaggaga
ctcttgaaacagtggctctgtgcaccattgtgcaatcctgctgcgatcaatgaccgcctg
gatgcagttgaagacctcctggctgaggctgccaaaatgtctgaaatccgtgatcttctg
aaaaaattgccagaccttgaaaaactcttgggcaagatccacagtattggatcatcactt
aatatccagaatcatccaaacaacagggcaattttgtatgaagagatgaggtatagtaag
aagaagattgtagactttttgtccacattagaaggatttaaaataatccttgagattatc
tccattttggaagatattggtgatggttttacatccaaaacacttaagcaaatagtgaca
gttaaatctaaaaatccaacaggctgtttcccagatttgaaagcagagcttgaaagatgg
gatacttcttttgaccataatgttgcacgcaggaccggtgtgattaatccgaaagctggg
tttgattctgattatgacaaagcactagaggatataaaggatgttgaggagcgcctccgt
cagtatatggaaaaacagcgcaaacggcttgggtgcaaagccatgatgtattggggagca
ggcaagaatcgctaccaaatggagattgcagaaagtgcattgcctaataacttgcctgat
gaatatgtgttgaggtctagcagaaaaggctacaaacgttattggaccaaagacatagag
aagatgctgaccgagatagtcagtgctgaagaacggagggatgcagcacagaaggattgc
atgaaaagattattttataactttgataaaaacagcaaagactggcgaatggcagtagaa
tgcattgcagttctagatgtcttactatgcctggcacagtacagtcagggatgtgatgga
ccattgtgccgaccagtatttctgctaccagaaaagaacacgccaccctttctggagctc
agatcttcacgccacccatgtattacaaaaactttgtttggggatgacttcatccctaat
gatatactgattggtgtggagggtgaaaagtcagattcctggactgatgctcgctgtgtt
ctggtgactggcccaaacatgggaggcaagtcgacacttatgagacaggctggactcctg
gtgataatggcccagttgggattctttgtacccgctgagtcttgtaggcttactcccgtt
gatcgagtgttcacaagactcggtgcttcagacagaattctgtcaggggagagtaccttt
tttgtggagctgagtgagacttccagtattctgcagcatgcaacagagcattcctttgtt
ctgatggatgaactaggcagaggtacagctacttttgatggaacagctattgctagtgca
gttgtcaaagagctttcagagaatatcaaatgccgtacaatgttttcaactcactaccat
tcgttagtagaggattacttccatagtccttctgtgcagctgggtcacatggcatgtatg
gtggagaatgaaactgatgatcctagccaggaaacaatcacattcctgtacaaattcatt
aagggggcctgtccgaaaagctatggctttaatgctgcaaggcttgctgacattcccgaa
gaaattattcaaaagggtcacaaaaaggcaagagactttgagaaatcagttctctcactg
aaactgttcaggaacctttgcctgattgctgaaggagctccacctgctgtagatgatctg
cataaactagtgactctgctgtacgagtga
DBGET
integrated database retrieval system
