Gekko japonicus (Schlegel's Japanese gecko): 107124566
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Entry
107124566 CDS
T04299
Symbol
DDX6
Name
(RefSeq) DEAD-box helicase 6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107124566 (DDX6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gja03019
]
107124566 (DDX6)
03036 Chromosome and associated proteins [BR:
gja03036
]
107124566 (DDX6)
Enzymes [BR:
gja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107124566 (DDX6)
Messenger RNA biogenesis [BR:
gja03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
107124566 (DDX6)
mRNA degradation factors
5'-3' decay
Decapping complex
107124566 (DDX6)
Chromosome and associated proteins [BR:
gja03036
]
Eukaryotic type
Gene silencing
piRNA pathway
107124566 (DDX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
107124566
NCBI-ProteinID:
XP_015283539
LinkDB
All DBs
Position
Un
AA seq
483 aa
AA seq
DB search
MSTARTENPVIMGLSSQNGQLRGPVKPSSGPGGGGTQAQQQINQLKHPNTINNGTQQQAQ
GMPSTLKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPS
PIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQV
SQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHV
QMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINL
MEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYS
CFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLH
RIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAEYHSEPVEE
EKP
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagtacggccagaacagagaaccctgttataatgggtctctccagtcaaaatggacag
ttgaggggcccagtaaaacccagcagtggtccaggaggcgggggaacacaggctcagcag
cagataaaccagctgaaacatcccaacacaatcaacaatggcactcagcagcaagcccag
ggtatgccctccactctcaaacctggcgatgactggaagaagactttgaaacttcctcca
aaagatctgcggatcaaaacttcggatgtgacttccactaaaggaaatgagtttgaagat
tactgtctgaaacgggagctgctgatgggaattttcgaaatgggctgggaaaagccatct
cctattcaggaggagagcattcctattgctctgtctgggagggacatcttggcaagagca
aagaacggaactggcaagagtggtgcctacctcattcccttacttgaacgacttgactta
aagaaggacaacatacaagcaatggtgatcgttcccacacgagagctggccctacaggtc
agtcagatctgcatccaggtcagcaaacacatgggaggggccaaagtgatggcaaccacc
ggaggaaccaacctgcgtgatgacataatgaggcttgacgatacagtacatgtggtgata
gctacaccagggaggattctggaccttatcaagaaaggagtagcaaaagtggaccatgtc
cagatgattgttctagatgaggcagacaagttgttgtcccaggattttgttcaaataatg
gaggacatcattctcacgctacctaagaataggcagatcttgctatactcagccactttc
cctctaagtgtacagaagtttatgaattcccacttgcagaaaccctatgagattaacttg
atggaggagctgacgctgaagggagttacccagtactatgcctatgttactgagcgccag
aaagtacattgcctcaacacattattctccaggcttcaaattaaccagtcgatcattttc
tgcaactcctcccaacgggttgaactgctagccaagaaaatctcccagctggggtattcg
tgcttctacattcatgcaaagatgaggcaggagcaccgcaatcgagtgttccacgatttc
cggaatggcttatgccgcaatcttgtttgcactgatctgtttacccgaggtattgatatc
caagctgtgaatgttgtgataaactttgattttccaaagctggcagagacatatctccac
cgtattggcaggtcaggtcggtttggccacctcggcctggccatcaacttgatcacctac
gatgatcgattcaacctgaaaagtattgaagagcagctggggacagaaatcaagcccatc
cccagtaacattgacaagagcctgtatgtggcagaataccatagtgaacccgtagaagag
gagaaaccttaa
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integrated database retrieval system
