KEGG   Gekko japonicus (Schlegel's Japanese gecko): 107124664
Entry
107124664         CDS       T04299                                 
Symbol
HLTF
Name
(RefSeq) helicase like transcription factor
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
gja  Gekko japonicus (Schlegel's Japanese gecko)
Brite
KEGG Orthology (KO) [BR:gja00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gja04121]
    107124664 (HLTF)
   03400 DNA repair and recombination proteins [BR:gja03400]
    107124664 (HLTF)
Enzymes [BR:gja01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     107124664 (HLTF)
Ubiquitin system [BR:gja04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    107124664 (HLTF)
DNA repair and recombination proteins [BR:gja03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    107124664 (HLTF)
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 ResIII zf-RING_5 zf-RING_UBOX zf-RING_2 zf-ANAPC11 RING_XB3-XBAT31 HDA2-3 zf-rbx1 zf-C3HC4_4 Prok-RING_4 zf-Nse DTHCT
Other DBs
NCBI-GeneID: 107124664
NCBI-ProteinID: XP_015283641
LinkDB
Position
Un
AA seq 996 aa
MGGIAMTDEDIDSGVLYGTLRGTVVGLRYYAGVVNNNEMVALQREPNNRYDVNAIKVNNV
NGEQVGHIKKELAACLAYIMDSKLALIEGVVPFGANNAFTMPVQLSFWGKPENKDVVLKH
LNVYNFKLAPPGKSLGLGFGHSGTSGRAGTSYSAPGHAAVQMTTEQLKTEFDKLFEDLKE
DDKTCEMEAAEAVLTSLLPHQKQALAWMISRENNKELPPFWEERENYFYNTITNFAEKKR
PENVLGGILADDMGLGKTLTTIAVILTNFHGGKPLPLEKKSDQLNEKCVSTVKTDLKAPR
ASDTKEENDSVLPQSSRPKRGGEKTPTYTISSDSEPDEKITQKANTKAQKTLPGSSKRRK
ASSVSDMKEENVLPQSSCPKRSRGRGKKSTYTDNDDSESEEKITNKKANAEAKKTQRGAR
KRKGASCDVEDNAFASALGKPAVSSKKAKKKGGTAVQSNNTEAEDNLRATLIVCPLSVLS
NWTDQLEQHIDPAVHLNTYVYYGSERTKDPAILSKQDIVLTTYNVLSSDYSAKSNSPLHK
FKWLRVVLDEGHTIRNPNAQQTKAVLDLDAQRRWILTGTPIQNSLKDLWSLLSFLKLKPF
TDREWWHRTIQRPVTMGDQGGLKRLQSLIKSITLRRTKTSKVKGKPVLKLPERKVFIQHI
TLTDEEKQIYHSLKNESTAAISRYFNEGTVLTHYADVLGALLRLRQLCCHPHLCASAPSS
TFEEGNGTPEELRAKLIEKMKLILSSGSDEECAVCLDSVSIPVITHCAHVYCKPCICEVI
QREKPNAKCPLCRKEVRLEQLVECPLEDSDDTEKSDQEWVSSSKVNALMHALLAQRKQNP
AIKSIIVSQFTKFLSLIEVPLRKSGFVFTRLDGALRQKKRVEAIQQFQSTEAGSPTIMLL
SLKAGGVGLNLTAASRVFLMDPAWNPAAEDQCFDRCHRLGQKKEVIITKFIVKHSVEENM
LKIQNKKRELAAGAFGAKKPSSSETKINEIKTLMDL
NT seq 2991 nt   +upstreamnt  +downstreamnt
atgggtggcattgcaatgacagatgaagatatagattcgggtgtcttatatggaactttg
cgtggcactgtggttggattgcgctactatgcaggggtggtcaataataatgaaatggtg
gcgcttcagcgagagcccaacaaccgatacgacgtgaatgctataaaagtgaacaatgtg
aacggagagcaggttggccacattaaaaaagaactggctgcgtgtctggcatacatcatg
gacagcaaattagcactaatagaaggtgttgttccttttggagcaaataatgctttcact
atgccagtacagctgagtttttgggggaaaccagagaacaaggatgtggttctaaagcat
ctgaatgtgtataactttaagttggctcctccaggaaaatccttaggcttgggttttgga
catagtgggacatcaggaagagctggaacaagttacagtgctccaggtcatgctgctgta
caaatgaccactgaacagctgaagactgagtttgacaaactgtttgaagatctgaaagaa
gatgataaaacatgtgaaatggaagcagcagaggctgttttaacgtcattacttccacat
cagaagcaggctttagcgtggatgatttcacgtgagaacaataaggagttgcctccattt
tgggaagagagggagaactacttctacaatacgattacaaactttgctgaaaaaaagcga
cctgaaaatgttcttggaggaatattggcagatgatatgggactgggtaaaacgcttacc
actatcgcagtcattcttaccaattttcatggtggcaaacctcttcctcttgaaaagaaa
agtgatcagttgaacgagaaatgtgtttctactgtgaaaactgacttaaaagcacctcgt
gcttcagatacaaaggaagaaaatgattctgttctgcctcagtcatcccgtccaaaaaga
ggtggagaaaagacgcccacgtatacaatcagtagtgactcggagcctgatgagaagata
acacaaaaagcaaacaccaaagcccaaaaaaccctgccaggatcaagtaaaaggagaaaa
gcatccagtgtttcagatatgaaggaagaaaatgttctgcctcagtcatcctgtcccaaa
agaagcagaggtagaggcaagaaatccacatatacagacaacgacgactcagagtctgaa
gagaagataacaaacaaaaaagcaaatgctgaagctaaaaaaacacagcgaggagcaaga
aaaagaaaaggagcttcttgtgatgtggaagacaatgcatttgcctctgctcttggaaaa
ccagctgtttcttcaaagaaggcaaagaaaaaaggtggcactgctgtgcagtctaataat
actgaagctgaagataatcttagagcaacactgatcgtctgtccactttctgttctgagc
aactggactgatcagcttgagcaacatatcgatccagccgttcatctgaacacttacgtt
tactatggttcagagcgcaccaaagatccagcaatcctttcaaaacaggacattgtgtta
acaacttacaatgttttatctagtgactacagtgcaaaaagtaatagtcctctgcacaaa
tttaagtggctgagagtggtgttggatgaagggcacacaatacgaaacccaaatgctcag
caaactaaggctgtgctagatctggatgcccaaagaagatggattttgacaggcacacct
attcagaattccttgaaggacttgtggtctcttctttcctttttaaagctgaaaccattt
acagacagagagtggtggcaccgaacaatccagcgtcctgtcactatgggcgatcaaggc
gggcttaagcgtttacaatccctgattaagagcattactcttcgaagaacaaaaacaagc
aaagttaaagggaagccagttttaaagcttccagaacgtaaagtatttattcagcatatt
actcttacagatgaagagaaacaaatctatcattcattgaagaatgagagcacagctgct
attagcaggtattttaatgagggaactgttttgacccactatgcagatgttctgggtgca
ctgcttagattgagacagttgtgttgtcatccacatctctgtgcaagtgcgccttcctcc
acctttgaagaaggtaatggtactcctgaagagctgcgtgcaaaattaatagagaagatg
aagctaattctaagctctggctctgatgaagaatgtgctgtttgcttagactctgtcagt
attcctgtgataacccactgtgctcatgtgtactgtaagccatgcatttgtgaagtcatc
caaagggagaagccaaatgctaaatgccctctttgcagaaaagaggttcgattagagcaa
cttgtagaatgtcctttggaagattctgatgatacagagaagtctgatcaagaatgggta
tcaagttcaaaggtcaatgccctaatgcatgctttgctagctcaaagaaagcaaaatcca
gctattaagagtataattgtttctcagttcacgaaattcctctctctaatagaggttcca
ctgagaaaatctgggtttgtcttcactcgtttggatggggcactgagacagaagaaaaga
gtagaggcaattcagcagttccagagcactgaagctggatccccaactataatgctgtta
tctctaaaagcgggtggtgttggcttgaatctcacagcagcttcacgagtctttttaatg
gatccagcttggaaccctgctgcagaggaccagtgttttgacagatgtcatagacttggg
cagaagaaggaagttatcatcacaaagttcattgtgaagcactcagtggaagaaaacatg
ctgaaaattcagaacaagaagagagagcttgcagccggagcctttggagccaaaaagcct
tcctctagtgaaaccaaaattaatgaaattaaaactttgatggatttataa

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