Gekko japonicus (Schlegel's Japanese gecko): 107126004
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Entry
107126004 CDS
T04299
Symbol
PARP4
Name
(RefSeq) poly(ADP-ribose) polymerase family member 4
KO
K10798
poly [ADP-ribose] polymerase 2/3/4 [EC:
2.4.2.30
]
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03410
Base excision repair
gja04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107126004 (PARP4)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
107126004 (PARP4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gja03032
]
107126004 (PARP4)
03036 Chromosome and associated proteins [BR:
gja03036
]
107126004 (PARP4)
03400 DNA repair and recombination proteins [BR:
gja03400
]
107126004 (PARP4)
Enzymes [BR:
gja01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
107126004 (PARP4)
DNA replication proteins [BR:
gja03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
107126004 (PARP4)
Chromosome and associated proteins [BR:
gja03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
107126004 (PARP4)
DNA repair and recombination proteins [BR:
gja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
107126004 (PARP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VIT
PARP
VIT_2
BRCT
VWA_3
VWA
BRCT_2
VWA_2
PARP_reg
PTCB-BRCT
LIG3_BRCT
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
107126004
NCBI-ProteinID:
XP_015284983
LinkDB
All DBs
Position
Un
AA seq
1788 aa
AA seq
DB search
MPEPIFTNCGFFLKLKKITIQEKNKLKDCIKENGGQITFAINDKCTHVVTDDADALSSVH
LKTIKKKQLPTVDVNFIWDSVKENRLLPPSDSEPLKALESTPDVKIVSVCLDDSQKVNDG
AKNGSESDWHDSESDDSSKSDDSSNTDELRWFSNNDKNTPYFPEDFEVAKYDVLEKVTAQ
SEYVVVELQCALQCCDYPFRIHTCYSILDGVKYQKQWTSTKTSEEARRAYVLCMEELKKA
DFELRHDFPREAEHLASTKLQEMLVVEAISSGTLSEEVGVFVELIWAEALGVLKHLLRKP
VTSISLNDVSKAEGVLLRAKKALDEGKSPNELTAVLAEFYTIIPHKSEIDYNVCKKLLSN
KQDLCQLIRDMLNVHEISMSHPDPPSLSKYRSLGCKIDVLDINSDEFNNVKEQVVQNNFS
KCPIEVLQIYNVSRRMETAAFESTLGNIQPLLHASSPSNFVGILSRGLLLPKMVVEEHGI
ERTDSGNLGCGVYFSNSISTSIKYSQPNKTDGTRLLVICDVALGRCLDTYQKDLSLTTAP
SGYESVHGIRQAKGNDSAFQDDEFVVYRTSQIKMKYVVKFRLADDKVEEFHPIIQVKLED
QAPVPEHQAQPKDYEMPRQNMLNNIAAGLLDRSGNPIPLKEVHIKGRIIDFVAQVVVFQT
YENTSDSPIEAKYVFPLDDTAAVCGFEAFIKGKHIIGEVKEKEVAHREYRDAVTRGDGAY
LMDQDAPDIFTVSVGNLPPSTRVLIKITYITELAYDDRNLSFLLPAAVAPWQQDKALNEN
TQDTVTKVAIKQIGTKPGGFSLEMSVEMPFKIDYIDSWTHKLKIKKTDCKAVIHTVEDSS
LGVAGFALGIGIGDVHLPRMWVEKHPDKETEACMLVFQPQFAVPYEPSSPCGETIICLDC
SNSMAGSEMRQAKQIALHALESCHFLPRLSVIKFGTNFVHFPFSPGKYKVDVTALKEFVS
SATPSMGNSDLWKALHYLSLLYPSKGKRSILLISDGHIQNEAMTLQTVKENARHTRIFTC
GVGYAANRHMLRSLSQYGAGTFEYFDAKTKYNWERKIGCQISRMHSRGCSAVSIKWQQFD
TNAPEPTYAPAQIQSLFINEYLLVYGFISQCTQATLKALIDNQELQTMVSTTELQKRTGT
MLHKLTARALIRDYEQGVLHENKTEHEMKKQQLKSLIIKLSLENSIVTQFTSFVAIEKRD
GNEDQGADTLNVSELVAKEDVDILPYMQYQVEDDHLVSVNSLACLEEYDFCFGEMSSSVL
SGQNLSPVSVDRQEGFPPPPPPHQQNAWVNLPVEDGEGERSREAPRRSTEGSRRKKPEIG
LLTQALDYSVSGLEGDSSSQLLGQKFLKAGRLTLDHQEPYADLSSLFAAPLALEADSHFS
SSLSSGQPFSSPSAIPTRSDAVFGSSAVSKPPDFPVQGIYFGGGHPALSQGRSLLLTSNQ
SPLPATTTGFGSALTPTLKGLPGQGMVLQSGPPESRGTLFSAPPFLSAPPSTEVPVPAAG
SSAPSCFMSRIKAKVRPPVPVQDQLSSPSGPQLLPFNPFVNFNAAPPAAPPVVQFEPGSG
APMAARRAMPLPEDQWPLLRLKGKKPPARLPSPPSLGKASAEPKSIALFGKQPEETLQNF
IEKKRRSKKKVCRMPAVQKTLSAVFWPQLSELQNQDGYWQLTPELGTLLDLDVNDLVNVS
LTKRGIQSLGLKGKEKLLQLIATLLVLQVVRLRQLEGITFKSLMKLNDSPPSRAFDAVKK
AVEWAKRTHQQFPAICQRLELGKDWDSATKKLLGIEITGTARPLANSK
NT seq
5367 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagccaattttcaccaactgtggatttttcttgaaactgaaaaaaataaccatt
caggagaagaacaagctgaaggactgcattaaagaaaatggcgggcagataacatttgca
ataaatgataagtgtacgcatgttgtcactgacgatgctgatgcgctcagttctgttcat
ctgaaaaccatcaagaagaagcagcttcccactgtagatgtcaatttcatatgggactca
gtcaaagaaaacagacttttacccccttctgactcggaacccctcaaggccttggaaagt
acacctgatgtgaagattgtctctgtctgtctggatgacagtcagaaggtaaacgacggt
gccaaaaatggcagtgagagcgactggcacgacagcgagtctgatgatagcagcaagtct
gatgatagcagcaacacagacgaactaagatggttttcaaataatgataaaaatacccct
tattttcctgaagactttgaggttgcaaagtatgatgtccttgaaaaggttacagcacaa
agtgaatatgttgttgttgaacttcagtgtgctctccagtgttgtgattatcctttccgc
atacacacatgttacagtatattggatggagtcaagtaccaaaaacaatggacatcaact
aagacttctgaggaggcccgaagagcctatgtgctttgtatggaagagctgaagaaagca
gattttgaattaagacatgactttccacgtgaagcagaacatttagcttcaacaaagtta
caagagatgcttgtagtagaagccatcagcagtggcaccttgtctgaagaagttggtgtc
tttgtggaactgatctgggctgaagcactcggggtcttgaaacatctgttacgtaaacca
gtgaccagcatcagcctgaatgatgtgagcaaagcggaaggagttctgcttcgggccaag
aaggcattggatgaggggaaatctccgaacgagctgaccgcagtgttagcggaattctac
acgatcatacctcataaaagtgagatagactacaatgtttgcaaaaagctgttgtctaac
aagcaggatctctgccagctaatcagggacatgctgaatgtacatgaaataagtatgtca
catcctgacccgccatccctttccaagtaccggtctttggggtgcaagatagatgttctg
gatataaatagtgacgagtttaataatgttaaagagcaagttgtccaaaataacttcagc
aaatgtcccatagaagttctgcagatatataatgtcagtcgaagaatggaaacggctgct
tttgagagtactcttggcaacattcagcccttactccacgcttcatctccttccaacttt
gttggcatcctttctcggggcctcctcctgccaaagatggtagttgaagaacatggcatc
gaaagaactgattccgggaacttgggctgtggcgtttatttcagcaattccataagtaca
agcatcaagtactctcagcctaataagacagatggaactcgactgctagtgatttgtgat
gtagcacttggaaggtgtttggatacttatcagaaggatctttcgttaactactgccccg
tcaggctatgaaagcgtgcacggaatccgccaggcaaaaggcaatgattcagctttccag
gatgatgagtttgtggtatacagaacgagtcagatcaaaatgaaatatgtggttaagttt
cgcctcgctgatgacaaagtagaggaattccatcccataattcaggttaagctagaagac
caagcacctgtcccagagcatcaggcacagcccaaagattatgagatgccaagacaaaat
atgctgaataatatagccgctggtcttctggatagatctggaaacccgattcctctgaaa
gaagttcatatcaagggaagaataatagacttcgtggcacaggtggtagtatttcagacc
tatgaaaatacatctgacagccccattgaagccaaatacgtctttcctttggatgacaca
gctgctgtatgtggatttgaggctttcatcaaagggaaacatataataggagaggtgaag
gaaaaagaagtagcccaccgggaatacagagacgctgtcactcgaggcgatggagcttac
ttgatggatcaggatgcccctgacatttttactgtttctgttggaaacctgccaccttca
accagggttctaatcaaaatcacctacattacggagctggcttatgacgatcgcaatctt
tccttcctcctgcctgcggctgtggcaccttggcaacaagacaaagcattaaatgaaaat
acacaggacacagtaacaaaagttgcaattaagcaaataggaacaaaaccaggtgggttc
tctttggagatgtctgttgaaatgccctttaagattgattacattgacagctggacacat
aaacttaaaataaagaaaacagactgtaaagccgtgatccatactgtggaggacagttcc
ttgggtgttgctgggtttgcactgggaattgggattggcgatgtccatttgcccagaatg
tgggtagagaagcatccagacaaagagactgaggcatgcatgctagtatttcagccacag
tttgctgtaccgtacgaaccttcaagcccctgtggagaaacaatcatctgcctggactgc
tccaattccatggcaggttcagaaatgcggcaagccaagcagattgcgttgcatgctctg
gagtcatgccattttctaccacggctaagtgttataaaatttggtacaaattttgtacat
tttcccttcagtcctggaaagtacaaagtggatgtcactgctctgaaggagtttgtttca
tctgctaccccttcaatgggaaactctgacttatggaaggcattgcattacctgagtctg
ctatatccttctaaaggcaaacgcagcattcttctaatatctgatggacatattcagaac
gaagccatgaccttgcagactgtgaaggaaaacgcccggcacaccaggatattcacgtgt
ggagttggctacgcagcaaatcgtcacatgctgagatctttgtcccaatatggagctgga
acctttgaatattttgacgcgaaaacaaagtataactgggagagaaagataggttgtcag
atctctcgaatgcattctcggggatgcagtgctgtttcaattaaatggcagcaatttgac
acaaatgcacctgagccaacatatgctcctgctcagatacaatctttgtttattaatgag
taccttctggtctatggatttatctcccagtgtactcaggccactttaaaagcactgata
gataaccaagaattgcagacaatggtatctacaactgaactgcagaagagaacaggaact
atgctccacaaacttacagcaagagccctcattagggattatgaacaaggggttcttcat
gagaacaaaacagaacatgaaatgaagaaacaacaattgaaatccctgatcattaaactc
agtctggagaattccatcgtgactcagtttacaagttttgtggcaatcgagaaaagggat
gggaatgaagaccagggtgctgacaccctcaacgtttcagaacttgtagccaaggaggat
gtagacatcttaccctacatgcaatatcaagtagaagatgaccatctcgttagtgtaaat
agtctagcatgtctagaggaatatgacttctgctttggagaaatgagttcatctgtactt
tcgggacaaaatctttctcccgtcagtgttgaccgacaggagggatttccacccccacct
ccaccccatcagcagaatgcatgggttaatttgcccgttgaggatggcgaaggagagaga
agcagggaagcacccagaagaagcactgaaggcagcagaaggaagaagcctgagattgga
ctgctcactcaggcattggattattctgtcagtggtctcgagggggactcttcatctcaa
ctccttgggcagaaatttttaaaagccggaaggctgactttggaccaccaggagccatat
gcagacttgtcctctctttttgctgctcctctagccttggaagcagatagtcatttttct
tcctcattatcatctggccagccattttcatcaccatcagctatcccaacccgttcggat
gctgtttttggttccagtgctgtgtcaaaacctcctgacttccctgtgcagggcatatat
ttcggaggtggacatcctgcactgtctcagggtcgcagcctattgttgactagcaaccag
agtccattgccagcaactaccacaggctttggttctgctcttacacccactttgaaaggc
ctccctggacaggggatggttctgcagagtggtcctcccgagtccagaggaacattattt
tcggcaccgccatttttatcagcaccaccttccacagaagttccggttcctgctgcggga
agttcagcccccagctgctttatgtcaaggataaaggcaaaagtcagacctcccgtgcct
gtgcaagatcagctctcctcaccgtctggcccgcaactattgcctttcaatcccttcgta
aattttaatgcggcacctccggctgctccgccagttgtccaatttgagcctgggtcaggg
gcacccatggcagctcgacgtgctatgcctttgccagaagaccagtggccacttctccgt
ctaaaggggaagaaacctcctgctcgtctgcccagtcccccttctctaggaaaggcatct
gcagaaccgaaaagcatagcactgtttggaaaacaaccagaggagactctacagaatttc
attgagaagaagaggagatctaagaagaaagtctgcagaatgcccgctgtacaaaaaaca
ctgagtgctgtattctggcctcagctctctgagctgcagaatcaggatggttactggcag
ctcacacctgaacttgggactcttttggatctggatgtgaatgatttagtcaacgtctca
ctaacaaaaaggggaattcagtctcttggtctcaaggggaaagagaagctgttgcagttg
attgcaacacttctggtactgcaggttgtacgactcaggcaactggaaggcatcactttc
aaatctctaatgaaattgaatgactctcccccatcaagggcatttgatgcagtgaagaaa
gcggttgaatgggcaaaaagaactcaccaacagttccctgctatctgccagcgtcttgaa
cttggaaaagactgggactctgccactaagaagctattgggtatcgaaataactggaacc
gcccgcccccttgccaacagtaaataa
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integrated database retrieval system
