Gekko japonicus (Schlegel's Japanese gecko): 107126272
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Entry
107126272 CDS
T04299
Symbol
CHD5
Name
(RefSeq) chromodomain helicase DNA binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gja03036
]
107126272 (CHD5)
Chromosome and associated proteins [BR:
gja03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
107126272 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
107126272
NCBI-ProteinID:
XP_015285302
UniProt:
A0ABM1LH64
LinkDB
All DBs
Position
Un
AA seq
1945 aa
AA seq
DB search
MLLPAGKLPSEFAFVEEEDGVLEALEDFFPEEQVNPQKKKKPKKLKENKASKVKRKKEGC
LDDEISENEEELGEKSDSEGSDYSPNKKKKKKLKEKKEKKVKRKKKDEEEEENEDGGLKE
PKTSAQLMEEWGLDDVDYAFSEEDYHMLTNYKAFSQFLRPLVAKQNPKIPMSKMMTVLGA
KWREFSANNPFKGSSAAAAAAAVAAAVETVAIAPAPLPTSVPPPLLPQPVIRKAKTKEGK
GPGVRKKIKNTKDSKKKGKGKKVAGLKFRFGGIANKRKKGSSSEEEEREESDLDSASIHS
SSVPSESSAGLGKKGKRRKKKKRFEEGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLV
CLDPELEKAPEGKWSCPHCEKEGIQWEPKDEEDEEEEIGEEEDDHMEFCRICKDGGELLC
CDTCPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWAWKEPPAPLASALPS
VDPEFAIPPPKPLEGIPEREFFVKWAGLSYWHCCWVKELQLELYHTVMYRNYQRKNDMDE
PPGFDYGSGDEDGKSEKRKNKDPHYAIMEEKYYRYGIKPEWMMIHRILNHSFDKKGDVHY
LIKWKDLSYDQCTWERDDMDIPDYENFEQQYWNHREMMLGEERLSKKGKKLHDDKLERPP
ETPIVDPTVKFDKQPWYIDTTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQT
IVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPGFYVVTYTGDKESRSVIRENEF
SFEDNAIRTGKKVFRMKKEAQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNN
QSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKED
QIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKLILTRNFEALNSKG
GGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKK
LRDGGHRVLIFSQMTKMLDLLEDFLEFEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFC
FLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVE
ERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVEGMISQAQRI
GLPEAMTPFSETPASKGVTVTPGLKKKHGGTPPGDNKDVEDSSVIHYDDAAISKLLDRNQ
DATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYWEKLLRHHYEQ
QQEDLARNLGKGKRVRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDEDEDFEERPEGQ
SGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSH
WLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLV
RKKVQEFEPVNGKYSTPDLIPEGPDIKKGSEVVSSDPNTPVPASPAHGPVGPTSQPEKGD
THLGIPEEKEQLEEKVKKPRDGQVPSGGEKTENEEREDGAESQAKPGEENTEEGEKAEPN
SEQPSKALADEASQENEKTAEKPELNASPCKGGSKDSKLDDTKAEEKGQAEAQQNGEKEE
EEDGKKDDKNGIRFMFNIADGGFTELHTLWQNEERAAVSSGKIYDIWHRRHDYWLLAGIV
THGYARWQDIQNDPHYVILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRA
AYLNMTQEPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLS
DMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTNRGSDPTVQQASFGSSQIYSNNFGP
NFRGPGPGGIVNYSQMPLGPYVTDI
NT seq
5838 nt
NT seq
+upstream
nt +downstream
nt
atgcttttgccagctgggaaattgccttcggaatttgcctttgtcgaagaagaggatggg
gtgctggaagccttggaggacttcttccctgaggagcaggtgaacccccagaagaagaag
aaacccaagaagctgaaggagaacaaggcttccaaagtcaagcggaaaaaggaggggtgc
cttgatgacgagatttccgaaaatgaggaggagctgggagaaaagtcagacagcgaaggc
agcgattattctccgaacaaaaagaagaagaagaagctgaaggagaagaaggagaaaaaa
gtcaaacggaaaaagaaagatgaagaagaggaagagaatgaagatggaggcttaaaggag
cccaagacctctgctcagctcatggaagagtggggcttggatgacgtggactacgctttt
tccgaagaagactatcacatgctgacgaactacaaggctttcagccagtttcttaggcct
ctggttgctaagcagaatcccaaaatccccatgtccaagatgatgaccgtcctgggggcc
aagtggcgggagttcagtgccaataaccccttcaaaggcagttcagcagcggccgcagca
gctgctgtggccgcagctgttgagacggtggccattgctccagcaccgcttcccacgagc
gtaccgccaccgctgctgccccagcctgtcatcaggaaagccaaaaccaaggagggcaaa
ggtcccggcgtgcggaagaaaataaagaacaccaaagacagcaagaaaaaggggaaaggg
aagaaagtggctggcctgaagttccgctttggggggattgccaacaagaggaaaaaaggc
tcctcgagtgaggaagaggaacgagaggagtccgacttggacagcgccagcatccacagc
tcctctgtgccctccgagtcctcggcgggcctgggcaagaagggcaagcggaggaagaag
aaaaaaagattcgaagaaggtgatggttatgagacagaccaccaggattactgtgaagtg
tgccagcagggcggggaaataattctgtgtgacacgtgtccccgtgcctaccaccttgtc
tgtttggacccggagctggagaaggcgccggagggaaaatggagctgcccacactgcgag
aaggaaggcatccagtgggaaccaaaggacgaggaagacgaggaagaggagattggcgaa
gaggaagacgaccacatggagttctgccgcatctgcaaagacggaggggagctcctctgc
tgcgacacgtgcccgtcctcttaccacctgcactgcctgaacccgccgctcccagaaatc
ccaaacggtgaatggctctgccctcgctgtacatgcccaccattaaaaggcaaagtccag
cgaattcttcactgggcctggaaggagcccccggccccgcttgcatctgccttaccctca
gtggatcccgagtttgcgatccctcctccaaagcctctggaagggatccccgagcgagaa
ttctttgtgaagtgggccggcctctcctattggcactgctgctgggtcaaggagctgcag
ctggagctctaccacactgtgatgtaccgcaactaccaaagaaagaacgacatggacgag
ccgccaggtttcgattatggctccggagacgaggatggcaagagcgagaagagaaagaac
aaagacccccactatgctataatggaggagaagtattaccgctatggcatcaagcccgag
tggatgatgattcaccgtattctcaaccacagcttcgacaagaagggagatgtccactac
ctgatcaagtggaaggatctctcctatgaccagtgcacctgggagagagacgacatggac
atcccagactatgaaaatttcgagcagcagtattggaatcacagggagatgatgttgggg
gaggagagactgagcaagaaagggaagaagctgcacgatgacaaactggaaaggcctcca
gaaacacctattgtggatcctacggtgaaatttgacaagcaaccatggtatattgataca
acaggtgggactttgcatccttaccaattggagggcctcaactggctgcggttttcctgg
gcgcaaggaacagacactattctcgccgacgagatgggccttggcaagaccgtccagacc
attgtattcctctactctctgtacaaagagggccactccaaaggtccatatctggtcagc
gctcccctgtcaacaatcatcaactgggaacgggagtttgagatgtgggcaccaggcttc
tatgtggtcacgtacacgggggacaaggagagccggtctgtaatccgtgaaaatgagttc
tcctttgaagacaatgctatccggactgggaagaaggttttccgaatgaaaaaagaagct
caaataaaattccacgtcttgctcacatcctacgagctcatcacgattgatcaggccatt
ctgggatctattgagtgggcatgtctggtggttgatgaggcgcatagactgaagaataac
cagtctaaattttttagggtgctcaacagctacaaaattgactacaagctgttactcact
gggacacccttgcagaacaacctcgaggagctctttcatctgctcaacttcctcacgccg
gagaggttcaacaacctggaagggttcctggaagagtttgctgacatctccaaggaagac
cagattaaaaaactgcatgatcttttgggccctcacatgcttcggaggctgaaggctgat
gtgttcaagaacatgcctgccaagacggagttgatcgtgagggtggaactcagtcagatg
cagaaaaaatactacaagctaatcctgaccaggaactttgaggccctgaactccaaagga
ggtggcaaccaggtgtcgctgctcaacatcatgatggatctgaagaagtgctgcaaccac
ccgtatcttttccccgtggcagctgtggaagccccggtattacccaacgggtcctatgat
ggcagctcgctggtgaagtcttcagggaagctgatgcttctgcagaagatgctgaaaaag
ctgcgagacggaggccatcgggtgctcattttctcccagatgacaaaaatgctggacttg
ttggaggatttcttagaatttgaaggttataagtacgagcggattgacgggggaattaca
ggagggctgaggcaggaagccatcgacagattcaatgctcctggagctcagcagttctgt
ttcctgctctctacccgagctggtggtttgggcataaacctagctacggccgacacggtc
ataatttacgattctgattggaatccccacaatgacatccaggcgttcagcagagctcac
cggatcgggcagaacaagaaagtgatgatctaccgctttgtgacgagggcctctgttgag
gagcgcatcacccaggtggccaagaggaagatgatgttgacgcatctggtggtgcgcccg
ggcctcggctccaagtccggctccatgaccaaacaagagctggatgatatcctgaaattt
ggaacggaagagctcttcaaggatgatgttgaaggtatgatatctcaggcccagcgcatt
ggactgcctgaggccatgacccctttctcggagaccccagcctctaaaggggtgacggtg
actcctggtttgaagaaaaaacatggcggtaccccacctggtgacaacaaagacgtggag
gacagcagcgtgatccattacgatgatgcggccatctcgaagctgctggaccgcaaccag
gatgcaactgacgacacggagctccagaacatgaacgaatatctcagctcttttaaagtg
gcccagtatgttgtgagagaagaggacggtgtggaggaagtggagcgtgaaatcatcaag
caagaggagaatgtggaccctgattattgggagaagctgttgaggcaccactatgaacag
cagcaggaagatctggcacggaatcttgggaagggcaagagagtccgcaagcaggtcaac
tacaacgacgcatcacaagaggaccaagagtggcaagatgagctctccgacaaccagtcg
gagtattctatcggctccgaagatgaggacgaagattttgaggagaggccggaaggtcag
agtggccggaggcagtcccggagacagctgaagagtgaccgggacaagcccctcccaccg
ttactggcaagagttggtgggaacattgaggtgctggggttcaacgcccggcagcggaaa
gccttcctgaatgccattatgcgctggggaatgcccccgcaggatgccttcaactcccac
tggcttgtgcgggacctccgtgggaaaagtgagaaggagttcagggcttatgtgtccctg
ttcatgagacatttgtgtgaacctggggctgacggtgctgagacctttgctgatggcgtc
cctcgtgaggggctgtctcgccagcacgtgctgacacgcattggtgtgatgtcattagta
aggaagaaggttcaagagttcgaacccgtcaatgggaagtacagcactccggatctgatc
ccggaaggaccagacatcaagaaaggcagcgaggttgtttcttcggacccaaacactcca
gtcccggccagcccagctcatgggccagtgggacccacatcacaaccagaaaagggggac
acacaccttgggattcctgaggagaaggagcaactggaagagaaggttaaaaagccccgg
gacggccaggtgccatccggtggggagaagactgaaaatgaggaaagggaagatggtgcc
gagagccaagcaaaacccggagaggaaaacactgaagagggagagaaggcagaacctaat
tcagaacagcccagtaaagctcttgcagatgaggcctctcaggagaacgagaagactgca
gaaaagccggaattaaatgctagtccctgtaaaggtggcagtaaagactccaagctagat
gacaccaaagctgaagagaaggggcaagcagaggctcagcagaatggggaaaaggaggag
gaggaggatgggaagaaggacgacaagaacgggattcggttcatgttcaacattgcggac
ggaggcttcacggagctgcacacgctgtggcagaacgaagagagggccgctgtttcctcg
gggaagatttatgacatctggcaccggaggcacgattactggctgctggcaggaatcgtc
acccacggctacgctcgctggcaagacatccagaatgaccctcattacgtcatcctcaac
gagcccttcaagtcagagatccacaagggcaactacctggagatgaagaacaagttcctg
gctcggcgattcaagctgctggagcaggcgttggtgatcgaggagcagctgcgccgggcc
gcgtacctcaacatgacccaggagcccaatcacccggccatggccctgaacgcccgcctg
gccgaagtggagtgccttgccgagagccaccagcacctctccaaagaatctctcgcgggg
aacaagcctgccaacgccgtccttcacaaagtcctaaaccagttggaagagctgttgagt
gacatgaaagcggacgtgactcgcttgccctccatgttgtcccggatcccacccgttgct
gctcgcctgcagatgtctgaacggagcattctgagccgtctgacaaaccgaggcagtgat
cccactgtccagcaggcctcctttggctcctcccagatctacagcaacaactttgggcca
aacttccgaggtccaggaccgggtggaattgttaactacagccagatgcccctgggaccg
tacgtgactgatatttag
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integrated database retrieval system
