Geobacillus genomosp. 3: M493_01400
Help
Entry
M493_01400 CDS
T02798
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
gjf
Geobacillus genomosp. 3
Pathway
gjf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gjf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M493_01400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gjf03019
]
M493_01400
03009 Ribosome biogenesis [BR:
gjf03009
]
M493_01400
Enzymes [BR:
gjf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
M493_01400
Messenger RNA biogenesis [BR:
gjf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
M493_01400
Ribosome biogenesis [BR:
gjf03009
]
Prokaryotic type
rRNA helicases
M493_01400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_19
Helicase_RecD
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AGT30640
UniProt:
S5Z8W2
LinkDB
All DBs
Position
209067..210470
Genome browser
AA seq
467 aa
AA seq
DB search
MTTFQELGLSQDVMKAVERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPI
VEKVDVKNGAVQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIRALKKH
PHVIVGTPGRILDHINRGTLRLEHVHTVVLDEADEMLNMGFIEDIEAILRHVPTERQTLL
FSATMPDPIRRIAERFMNEPELVKVKAKEMTVPNIQQYYLEVHEKKKFDILTRLLDIQAP
ELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGSIEILVATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGMAMTFVTPREIGQLHHIERTTK
RKMERMKPPTLDEALEGQQRVAIEKLLNVAETENLSFYKRAAEELLEEHDSVTIVAACLK
MLTREPDTTPVKLTEEPPLAVKREKKRGGRPDSSARGRTKKRRITAH
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
ttgacgacatttcaagaactaggattaagtcaagacgtaatgaaagctgtcgagcggatg
gggtttgaagaaacgaccccgattcaagcgaaaacgatcccgctcagcctgcaaaataaa
gatgtgatcggccaagcgcaaaccggaaccgggaaaaccgcagcgtttggcatcccgatc
gtcgaaaaagtggacgtcaaaaacggcgccgttcaagcgctcgtcgttgcaccgacgcgg
gagctcgccattcaagtgtcggaagaactgtataaaatcggcgcggtcaagcgggtgcgc
gtcctgccgatttacggcggacaggatattgagcggcaaattcgcgccttgaaaaaacat
ccgcacgtcatcgtcggcacgccgggccgcatccttgaccatatcaaccgcggcacgctg
cgccttgagcacgtgcataccgtcgtgctcgatgaggccgatgaaatgttgaatatgggc
tttattgaggacattgaagcgattttacgccatgtgccgaccgagcggcagacgctgttg
ttctctgcgacgatgccggatccgatccgccgcattgccgagcggttcatgaatgagccg
gagctcgtcaaagtgaaggcgaaggaaatgaccgtgccgaacattcaacagtactactta
gaagtgcacgagaaaaagaaatttgacattttgacacggcttctcgatatccaggcgccg
gagttggcgatcgtgtttggccgcacgaagcggcgcgtcgatgagcttgccgaggcgctc
aacttgcgcggctatgcggcggaaggcatccatggcgatttgagccaggcaaagcggctg
tcggtgttgcgcaaatttaaggaaggatcgattgaaattttagtcgcaacggacgttgcc
gcgcgcgggctcgatatttccggcgtgacgcacgtgtataactttgacatcccgcaagac
ccggaaagctatgtccatcggatcggacgcaccgggcgcgccggcaagacagggatggcg
atgacgtttgtgacaccgcgggaaatcggtcagctccatcatattgagcggacgacgaag
cggaaaatggagcggatgaagccgccaaccctcgacgaggcgcttgaaggccaacagcgc
gtcgccattgaaaagcttctcaatgtcgcggaaacggaaaacttatcattttacaagcgg
gccgccgaggaattgcttgaagagcatgactcggtaacgatcgtcgcggcctgcctgaaa
atgttgacgcgcgagccggacacgacgccggtgaagttgacggaagagccgcctttagcg
gtcaaacgggagaaaaagcgaggcggccgcccggacagctcagcgcgcggccggacgaaa
aaacggcggattacggcgcattaa
DBGET
integrated database retrieval system
