Geobacillus genomosp. 3: M493_03555
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Entry
M493_03555 CDS
T02798
Name
(GenBank) ATP-dependent helicase
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
gjf
Geobacillus genomosp. 3
Brite
KEGG Orthology (KO) [BR:
gjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gjf03400
]
M493_03555
Enzymes [BR:
gjf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M493_03555
DNA repair and recombination proteins [BR:
gjf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
M493_03555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
AAA_16
DEAD
Motif
Other DBs
NCBI-ProteinID:
AGT31018
UniProt:
S5ZKZ6
LinkDB
All DBs
Position
597592..601113
Genome browser
AA seq
1173 aa
AA seq
DB search
MVVIVMSLRFLLGRSGSGKTAVCLEEIRRQLQEDPKGRTIVYLVPEQMTFQCEYALIHTE
GVEGMIRAQVFSFPRLAWRVLQETGGMSRYYVHDVGVQMMIRKIIEQRKQELKLFGRAAD
KSGFVEQMHEMIAECKRYCLAPDELRRHADMLESGSGQPGRRLLADKLSDVALVYEELER
SLLGHYLDSEDYLRLLAEHIPRSGYLHGADIYIDGFHHFSPQEYMVIEQLLHHCRRVTVC
LTADRPYDDGMPDELNLFYLPAQTYRQLRELALANDIMIEPPVVLSVNRRHQDGALVHLE
AQFHRRPLPPYEAETDAIRLYEAANRRAEIEAVAREIIRLVRDEGARYRDIALIIRQAEA
YRDLVKTVFFDFDIPYFVDEKEPMHHHPLMELVRAALETVVTRWRYEAVFRAIKTDLLFP
VDGDLAAWREAADKLENYVLAYGVKGEKWTSGERWTYRRYQALDGLNVPQTDEERQLEDK
LNAWREALTAPLRRFERRLQRAADGRDFCAALYLFLEELQIPKKLEQMSAQAEADGRLVE
ARQHEQAWNAVVDLLDQYVEMLGTESLPLPEFAKIIEAGLDRLEFALVPPAIDQVIVAQL
DRSRLIGIKYAFIIGANDGVIPAKAKEEGLMAEVEREQLREFGMALAPGGREQLFYDPFF
VYLALACPSRRLYVTYPLADGEGKALMPSPLIKQLVQLFPHLPVHLCGHDPFDAPEEKPE
AFVTAPRATQTYLISQLRAWKRNYGIAPLWWDVYNVLINHPEWKARVQQAVSALFYTNQA
PTLKRQWSRRLYGKKIQASVSRMEQFQKCPYAHFVSHGLRLKERNVFRLEAPDVGQLFHA
AIKQIADRVRERHLDWKELSRLECERLSAEAVERIAPLIQQQVLSSSNRYEYMKRKLKKV
VARTTQVLSEHARASGFAPIGFELSFGPGGDLPPLRFQLRDGTVMELVGRIDRVDKAESS
QGVLLRIIDYKSSAKTLDLTEVYYGLALQMFTYLDIVLTYAEQLVGQSALPAGVLYFHIH
NPIIQAKRWLDDEIERTRILLEPFRMRGLLLADAEAIRLMDNQTENGQWSFIVPAQLTRT
GAIHARSSVASASDFAALRRHVRRLFVDIGEQIADGDISIAPYKLKNKTACEFCAFKPVC
QFDESLSGNGYRKLAPQTKDAVIETLTEREEGS
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgatcgttatgtcgctgcggtttttgctcggtcggtcgggaagtggaaaaacg
gctgtctgtctcgaggaaattcgccgtcagctgcaagaagatccaaaggggaggacgatt
gtctaccttgtcccggaacaaatgacatttcaatgtgaatacgcgttaatccataccgag
ggagtagaggggatgatccgcgctcaagtgttcagcttcccccgcctcgcctggcgcgtg
ttgcaagaaacaggaggcatgagccgttactacgtccatgacgttggcgtgcaaatgatg
attcgtaaaattattgaacagcgcaaacaggagctgaagctatttggacgtgcggcggac
aaaagtggttttgtcgaacaaatgcatgagatgatcgctgaatgcaagcggtattgcctg
gcgccggatgaactccgccgccacgccgatatgctcgaaagcgggtcaggccaaccgggc
cgccgtttgctggccgataagttaagcgatgtggcgctcgtttatgaggagttggagcgg
agccttctcggccattatcttgattcggaagattatttgcgcctgcttgccgagcacatc
ccccgctccggctacttgcatggcgccgacatttatattgacggttttcatcatttttcc
ccacaggaatatatggtcattgaacagcttcttcaccattgccggcgcgtcaccgtttgc
ttgacggctgaccgcccgtacgatgacgggatgccggacgagctcaacctcttttacttg
ccggcgcagacataccgccagttgcgcgaacttgctttggctaacgatattatgatcgaa
ccaccggtcgtgctttctgtcaaccgccgccatcaagacggggcgctcgtccatcttgag
gcgcagtttcaccgccgcccgctgcccccgtacgaagcggagaccgacgcgattcgcctt
tacgaagcagccaaccgccgcgcggaaatcgaggcggtcgctcgggaaatcatccgtctc
gtccgcgacgaaggggcacgctaccgcgacattgcgctcatcatccgccaggcggaggcg
tatcgcgatctggtgaaaacggtgttttttgactttgacatcccgtattttgtggatgaa
aaagagccgatgcaccatcacccgctcatggaactcgtgcgcgctgctttggagacagtg
gtgacgcgttggcgctatgaagcggtctttcgcgccataaaaacggatttgctctttccg
gttgatggcgacttggccgcgtggcgcgaggcggccgacaagctcgaaaactacgtgctc
gcctatggggtgaaaggtgaaaaatggacaagcggcgagcgctggacataccgccgctac
caggcgctcgacgggctgaacgtaccgcagacggatgaagagcgacagcttgaagacaag
ctcaacgcatggcgcgaggcgctgacggccccgctccgccggtttgagcgtcgtctgcaa
agggccgctgacgggcgcgatttttgcgcggctttatatctctttttagaagagttgcaa
attccaaaaaaactagagcaaatgagcgcgcaagcggaagcggatggacgcctcgtcgaa
gcgcgccaacacgagcaggcgtggaacgcggtcgttgatttgctcgaccaatatgtcgaa
atgcttgggacggaatcactgccacttcctgagtttgctaaaattattgaagctgggctc
gaccgacttgaatttgctcttgttccgccggcgatcgaccaagtgatcgtcgctcagctc
gaccggtcgcgcctgattgggatcaaatatgcgtttatcatcggggctaatgacggcgtc
atcccggccaaggcgaaggaagaggggctcatggccgaggtcgagcgggagcaattgcgc
gaattcggcatggcgcttgcacccggagggagggagcagctgttttacgatccatttttt
gtttacttagctctggcctgtccgagccggcgtctatacgttacatatccgctcgccgat
ggcgaagggaaagcgcttatgccgtccccgcttattaaacagttggttcaactgtttccg
catctgcctgttcatttatgcggccatgatccgttcgatgccccggaggagaaaccggag
gcgtttgtcactgcgccgcgggcgacacagacgtatctcatcagccagctgcgggcatgg
aaacgaaattacggtattgctccgctttggtgggatgtgtataacgtgctgatcaaccat
ccggaatggaaggcgcgagtgcagcaggcggtgtcggcgctgttttatacgaatcaggcg
ccaacgctcaaaagacaatggagccggcggctgtacggaaagaaaattcaggcgagcgtc
tcgcgcatggaacagttccaaaaatgcccgtacgctcatttcgtttcacacggtctgcgc
ctgaaagagaggaatgtcttccgccttgaggcaccggatgtcgggcaactgtttcatgcc
gccatcaagcaaattgccgaccgagtgcgcgaacggcacctcgactggaaagagctatca
agattggaatgtgagcggctgtcggccgaagcggtcgaacgaattgccccgctcattcag
cagcaagtgctatcgagttctaatcgctatgaatatatgaaacggaaattaaaaaaggtc
gtcgcccgcacgacgcaagtgttgagcgaacatgcgcgggcgagcggttttgccccgatc
gggttcgagttgtcatttgggccgggcggtgacttgccgccgcttcgcttccagcttcgt
gacggaacggtaatggagctcgttgggcggatcgaccgcgttgataaggcggaaagcagc
caaggggtgctcctgcgcatcatcgattacaaatcgagcgccaaaacgcttgatttgaca
gaagtgtattacggtttagcgctgcaaatgttcacgtatttggatattgtactaacgtat
gccgaacagctcgtcggccagtcggctctgccagcgggggtgctttatttccacatccac
aacccgattattcaagcgaagcgatggcttgacgacgaaatagaaaggacaagaatcctg
cttgagccgttccggatgcgcggattgctgctcgctgacgccgaggccatccggctgatg
gataaccaaacagaaaatgggcaatggtcgttcattgtccctgcccagctgacgagaacc
ggggcgattcacgcgcgttcttcagtggcgagcgcatccgactttgccgcgttgcgccgg
cacgttcgccgcttgtttgttgatattggcgaacaaattgccgatggcgacatctcgatc
gccccgtacaagctaaaaaacaaaacagcgtgcgagttttgcgcctttaaaccggtatgt
caattcgatgaatcgttatcgggcaacgggtatcggaaattggctccgcagacgaaggat
gcggtgatcgaaacattaacggaaagggaggaagggtcatga
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