Geobacillus genomosp. 3: M493_07040
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Entry
M493_07040 CDS
T02798
Name
(GenBank) UvrD/REP helicase subfamily
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gjf
Geobacillus genomosp. 3
Pathway
gjf03420
Nucleotide excision repair
gjf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gjf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M493_07040
03430 Mismatch repair
M493_07040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gjf03400
]
M493_07040
Enzymes [BR:
gjf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M493_07040
DNA repair and recombination proteins [BR:
gjf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M493_07040
MMR (mismatch excision repair)
Other MMR factors
M493_07040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
SLFN-g3_helicase
UvrD_C_2
PhoH
AAA_11
AAA_14
AAA_30
ADDB_N
AAA_12
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
AGT31697
UniProt:
S5Z3Z1
LinkDB
All DBs
Position
1282324..1283841
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AA seq
505 aa
AA seq
DB search
MLINGSAGTGKSLTLIYKLLKVMEQENEPKRILYCSFNTTLIEDARKRIEQSSKFHEIKD
KHTLHMETFHYMAARILREIGFPNAEFLRINLENLRRYEDAITRRTIALVDTFMESEKYK
KLPLEQKLYKTHAGTFLMDEILWMKANGFVTEELYYDCERAGRGNIPRLTKEQRRTVFYL
YKEYEKMLKKQFHDHLDLEDYALLLLKHFEDIPDSLKYDYIFVDEVQDLQAMQLKALVRL
TKKSIVVSGDPKQRIYKRSPFSYRDLGLHIEGRKTRNLRTNYRSTKQIMKLASSLEFIDE
ENDRLDDQRFVREGKKPSIYFFSGSKELSCHLVNQVKVIQKNDPDATIAVIHRHDGDKYA
ISQCPVLMELKKYFDVITTSQYGRRFDLNKQKKPIFFTDAYSVKGLEFDYVFLIHFDRDH
YPSKKRIEELDKRAGDNKNSDGYKADFEAILNDEKKVLYVAITRAKKEVQLMYTGRSFRS
ICPFVRNFRKEDYDAFGFDSSIYSK
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgttgatcaacggttcggcgggcaccggcaaaagcctgacattaatttataagttgcta
aaagtcatggaacaggaaaatgaaccgaagcgcattttatattgttcatttaatacgacg
cttattgaagatgcaagaaaacgaatcgagcagtcgagcaagtttcacgagatcaaggat
aaacataccttgcatatggaaacttttcactatatggcggcaaggattttaagggaaatt
ggttttccaaacgcagaatttttgcggatcaaccttgaaaacttgcggcgctatgaggac
gccattacgcgccgtacgatagcgcttgtagatacgtttatggaaagcgaaaaatataaa
aagctgccgctggaacaaaaactttacaaaacgcatgcaggtacatttttaatggatgaa
attctttggatgaaagcgaacggttttgtcacagaagaattgtattatgattgtgaacgg
gcgggaaggggaaacatcccgcgattaaccaaagagcagcgccgaacggttttctatttg
tataaggaatatgaaaaaatgttaaaaaaacagttccacgatcatttagatttagaagat
tatgctttgttgctgttgaaacattttgaggatattccggattcattgaagtacgactat
atttttgttgatgaagttcaggatttgcaagcgatgcaattaaaagcactggtcagatta
accaaaaaatcaattgttgtctccggcgacccgaagcaacgtatttacaaacgaagcccg
ttctcttatcgggatttagggttgcacatcgaggggaggaaaacgagaaacttgcgaaca
aactaccgatcaacaaaacaaatcatgaaactggcaagcagtttggagttcattgatgaa
gaaaacgaccgtttggatgatcaacgttttgtgagagaaggaaaaaaaccgtcgatctac
tttttctcgggctcgaaagaactgagttgtcatctagtaaaccaagtaaaagtgattcag
aaaaacgacccggatgcgacaatcgctgttatccaccgtcatgatggagacaaatatgca
attagtcaatgtccggttcttatggaattaaagaaatactttgatgtcatcaccacatcc
caatatggaagaagatttgatttgaacaaacaaaaaaagccgatcttctttacggatgca
tatagcgtcaaagggcttgagtttgattatgtatttttgattcattttgaccgtgatcat
tatccgagtaaaaagaggattgaagagttggataaacgagccggtgacaataaaaatagt
gacggctacaaggcggattttgaagctatactcaatgacgaaaagaaagttctttatgtt
gcaatcactagggcgaaaaaagaagtgcagttaatgtatactggccgcagctttagaagt
atttgtccttttgtaagaaatttccgcaaagaagattacgatgcctttggctttgattca
agtatatattccaagtaa
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