Geobacillus genomosp. 3: M493_11845
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Entry
M493_11845 CDS
T02798
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
gjf
Geobacillus genomosp. 3
Pathway
gjf00300
Lysine biosynthesis
gjf00470
D-Amino acid metabolism
gjf01100
Metabolic pathways
gjf01110
Biosynthesis of secondary metabolites
gjf01120
Microbial metabolism in diverse environments
gjf01230
Biosynthesis of amino acids
Module
gjf_M00525
Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
gjf_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gjf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
M493_11845
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
M493_11845
Enzymes [BR:
gjf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
M493_11845
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AGT32617
UniProt:
S5Z6X3
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All DBs
Position
complement(2214590..2215903)
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AA seq
437 aa
AA seq
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MFFHGTSRVNEKGHLEIGGVDTVELAEMYGTPLYIYDVALIRTRARAFKEAFHRHGVQAQ
VAYASKAFSSIAMVQLAAEEGLSLDVVSGGELYTALAAGFPPERIHFHGNNKSRDELAMA
LEHGIGCIVADNFYELELIEQLASGRAVPVLLRVTPGVEAHTHDYILTGQEDSKFGFDLN
NGQADEAFRRVMASPSFQLLGVHCHIGSQIFETAGFVLAAQKVFTKMAEWNKAYGFIPSV
INLGGGFGIRYTEEDDPIPVSAYVDCIVKEVKRQAETCQLPLPEIWIEPGRSLVGDAGTT
IYTIGSRKDVPNVRTYIAVDGGMSDNIRPALYGAKYEAVLANRVLGERTETVSIAGKCCE
SGDMLIWDLALPEAKPGDYLAVFCTGAYGYSMANNYNRLPRPAVVFVENGDAQLVVKRET
YEDLIQHDLPFKAKVRK
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgttttttcatgggacgagccgtgtcaatgaaaaaggacatttggaaatcggcggcgtc
gatacggtcgaactggccgagatgtacggcacgccgctttatatttatgatgttgcgttg
atccggacgcgggcgcgcgcgtttaaagaagcgtttcaccgccatggcgttcaggcgcaa
gtggcttacgccagcaaggcgttttcctcgattgccatggtgcagctcgctgctgaggaa
gggctgtcgcttgacgtcgtgtcgggcggggagctgtatacagctttggctgccgggttt
ccgccggagcgcatccatttccatggcaacaacaaaagccgagacgaactggcgatggcg
ctcgaacatggcatcggctgcatcgtcgccgacaacttttacgagcttgagctgattgaa
cagctggcttccggccgggcggtcccggttttgctccgcgttacgccgggcgtcgaggcg
catacgcacgattatattttaacaggacaggaagactcaaagtttggctttgacttaaac
aatggccaagcggatgaggcgtttcgccgtgtgatggcctcgccttcgtttcagctgctt
ggcgttcattgccatatcggttcgcaaatttttgaaacagccggctttgtgcttgctgca
caaaaagtattcacaaagatggctgaatggaacaaagcatacggatttatcccttcggtt
attaaccttggcggcggctttggcatccgctatacggaagaagacgatcccattccggtg
tcagcgtacgtcgattgtattgtcaaagaagtgaaaaggcaagctgagacttgccagctt
ccgttgccagagatttggatcgagccgggccgttcgctcgtcggcgatgcgggaacgacg
atttacacgatcggctcgcgcaaagacgtgccgaacgtccgcacgtatattgccgttgac
ggcggtatgagcgacaacatccgtccggcgctgtacggggcgaaatacgaagcggtgctc
gccaaccgggtgctgggcgagcgaacagaaacggtctcgattgccgggaagtgctgtgag
tcgggcgatatgctcatttgggatctcgcgctgcccgaggcgaagccgggcgactatttg
gctgtcttttgcaccggtgcctatggctattcgatggcgaacaactacaaccgcctgccg
cgcccggcggtcgtttttgtggagaacggcgacgcccagctcgttgtcaaacgggaaacg
tacgaagatttaatccagcatgatttgccgttcaaagcgaaggtgagaaaataa
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