Geobacillus genomosp. 3: M493_12840
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Entry
M493_12840 CDS
T02798
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
gjf
Geobacillus genomosp. 3
Brite
KEGG Orthology (KO) [BR:
gjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gjf03019
]
M493_12840
03009 Ribosome biogenesis [BR:
gjf03009
]
M493_12840
Enzymes [BR:
gjf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
M493_12840
Messenger RNA biogenesis [BR:
gjf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
M493_12840
Ribosome biogenesis [BR:
gjf03009
]
Prokaryotic type
rRNA helicases
M493_12840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Flavi_DEAD
DUF3391
Motif
Other DBs
NCBI-ProteinID:
AGT32814
UniProt:
S5Z1E6
LinkDB
All DBs
Position
complement(2390667..2391977)
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AA seq
436 aa
AA seq
DB search
MAETQFTRFSFQPFIIEAIQALRFYKPTEIQERIIPGALRGESMVGQSQTGTGKTHAYLL
PIIEKIAPERAEVQAVITAPTRELATQIYHETLKITKFCPKDRTIVARCFIGGTDKQKAL
EKLHVQPHIVIGTPGRINDFIREQALDVHTARTLVVDEADLMLDMGFITDVDQIAARMPK
ELQMLVFSATIPEKLKPFLKKYMENPTFVQIEPKQAANENIEHVLIPLRGREKVKLLYDV
LVSYNPYLAIVFVNTRKRADEVADLLAEQGLKVGVLHGDLTPRERKKMMNQIRELEFQYM
VATDLAARGIDIEGVSHVINYELPDDLQFYIHRAGRTARAGYSGIAATIYEPGDQDAIAR
LEKMGISFVHRDLVRGEWKELPPWNRRGKRAGEKEDELAPVVARLKKAKKVKPGYKKKLR
AELERKKKRLDRFKKS
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaacgcagtttacccgtttttcgtttcaaccgtttatcatcgaagccattcaa
gcgcttcgtttttataaaccaacggaaattcaagaacgcatcattccgggggcgttgcgc
ggcgaaagcatggtcggtcagtcgcaaaccgggacgggaaaaacacatgcttatttattg
ccaatcatcgaaaagatcgccccggagcgtgcggaagtacaggcggtcatcacagcaccg
acgcgcgagttggcaacgcaaatttatcatgaaacgttaaagatcacgaaattttgcccg
aaagaccggacgattgttgctcgctgcttcatcggcgggacggataagcaaaaagcgctc
gaaaagctccatgtgcagccgcacattgtcatcggcaccccggggcgcattaacgatttc
attcgcgagcaggcgcttgatgtgcatacggcgcgcacccttgtcgtcgatgaagccgat
ttaatgctcgatatgggcttcatcaccgacgttgaccaaattgccgctcgaatgccaaaa
gagttgcaaatgctcgtcttttcggcgacgattccagaaaagctgaagccgtttttgaaa
aaatatatggaaaacccgacattcgtccagattgagccgaaacaagcggcgaatgaaaac
attgagcatgtgctcattccactgcgcgggcgcgaaaaagtcaagctcctttacgatgtg
cttgtcagctacaatccgtatttagctattgtgttcgttaatacgagaaagagggcggat
gaagtcgccgaccttcttgcggagcaagggctgaaagtcggtgtgctgcatggcgatttg
accccgcgcgagcgaaaaaagatgatgaaccaaattcgcgagctcgagtttcaatacatg
gttgccaccgacttggctgcgcgcggcatcgacatcgaaggggtcagccatgtcatcaac
tatgagctgcccgatgatttgcagttttatattcaccgtgccggaaggacggcgcgcgcc
ggctatagcggcattgcggccaccatttacgaaccgggcgatcaagacgcgattgccaga
ttggaaaaaatggggatttcatttgttcatcgcgatctcgtgcgcggcgaatggaaggag
cttcctccgtggaaccggcggggcaagcgggctggcgagaaggaagatgaactggcaccg
gtggtcgctaggctgaaaaaggcgaagaaagtgaagccgggctataagaaaaagctgcgt
gccgagctcgagaggaagaaaaagcggcttgaccgcttcaaaaaatcgtag
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