Geobacillus genomosp. 3: M493_17975
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Entry
M493_17975 CDS
T02798
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
gjf
Geobacillus genomosp. 3
Pathway
gjf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gjf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M493_17975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gjf03400
]
M493_17975
Enzymes [BR:
gjf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
M493_17975
DNA repair and recombination proteins [BR:
gjf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
M493_17975
Prokaryotic type
M493_17975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AGT33801
UniProt:
S6A4A6
LinkDB
All DBs
Position
complement(3358150..3358839)
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AA seq
229 aa
AA seq
DB search
MPILQNDWAPLLDEEFQKPYYVKLRGFLKEEYRTRTIYPDMHDIFNALHYTPYANVKVVL
LGQDPYHGPGQAHGLSFSVKPGVPVPPSLVNIFKELHDDLGCYIPDNGYLVKWAEQGVLL
LNTVLTVRRGQANSHRGKGWEYFTDRVIELVNEKDDPVVFLLWGRNAQEKKERITNPRHL
IIEAPHPSPFSAARGFFGHRPFSRTNTFLTEHGREPIDWQIENIGARAE
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgccgattttacaaaacgactgggctccgctgcttgacgaggagtttcaaaagccgtac
tacgtaaagctgcgtgggtttttaaaggaagaataccggacgcggacgatttatcccgat
atgcacgatattttcaacgcccttcactatacaccgtacgcgaacgtcaaagttgtgttg
ctcgggcaagatccgtatcacggcccggggcaggcgcacgggcttagtttttccgtcaag
ccgggcgtgccggtgccgccgtcgttagtgaatatttttaaagagctgcatgacgatctt
ggctgctacataccggataacggctatcttgtcaaatgggccgagcagggcgtgttattg
ttaaacacggtgctgacggtccgccgtgggcaggcgaactcccaccgcggcaaagggtgg
gaatatttcaccgaccgcgtcattgagctcgtcaatgaaaaggacgatcccgtcgtcttt
ttgctttggggccggaacgcacaggagaaaaaagaacggattacaaatccgcgccatctc
attattgaagcgccgcacccgagcccgttttccgccgcgcgcggctttttcggccaccgc
ccgttttcgcggacgaacacctttttaaccgagcacgggcgcgaaccgattgactggcaa
attgagaacatcggcgcccgcgccgaatga
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