Gordonia jinghuaiqii: H1R19_01900
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Entry
H1R19_01900 CDS
T07538
Name
(GenBank) DNA polymerase III subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
gji
Gordonia jinghuaiqii
Pathway
gji03030
DNA replication
gji03430
Mismatch repair
gji03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gji00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H1R19_01900
03430 Mismatch repair
H1R19_01900
03440 Homologous recombination
H1R19_01900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gji03032
]
H1R19_01900
03400 DNA repair and recombination proteins [BR:
gji03400
]
H1R19_01900
Enzymes [BR:
gji01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H1R19_01900
DNA replication proteins [BR:
gji03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H1R19_01900
DNA repair and recombination proteins [BR:
gji03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H1R19_01900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
AAA_22
DNAX_ATPase_lid
RuvB_N
AAA_30
AAA_19
AAA_14
AAA_16
Rad17
Mg_chelatase
AAA_18
Motif
Other DBs
NCBI-ProteinID:
QMT01970
UniProt:
A0A7D7RBB5
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All DBs
Position
452927..455536
Genome browser
AA seq
869 aa
AA seq
DB search
MALYRTYRPATFADVVGQEHVTDPLSHALDSGRINHAYLFSGPRGCGKTSSARILARSLN
CVEGPTSRPCGTCTSCVALAPGGPGNLDVIELDAASHGGVDDTRELRDRAFYAPAESRYR
VFIVDEAHMVTNAGFNALLKIVEEPPEHLIFVFATTEPEKVLPTIRSRTHHYPFRLLAPP
VMRGLLEKICEREGVTVAPEVYPLVIRAGGGSPRDSLSILDQLLAGADDQGVAYERALAL
LGVTDVALIDTAVDALADADGSALFGTVEKVVDAGHDPRRFAVDLLERLRDLILLQAVPD
AADRGLVEAPGEQLARMQSQIETLGPASLTRFAEIVHNALGEMRGTTSPRLLLEVMCARM
LLPAVSSDDAALLQRLERLESGIGTTSIPVPAKPAEPEPEPKFLRPSQRKAMEEAKAAEA
AKQAAAEAAEADAAPVSTPAAPAVEEQAPEKVAAEKVAAEKVAAEAAEPVAAQVPAVASI
VDEPAADEPVAADSVAADSVTVDTVTDEEMLDELIVEGPALEDAVAEAEAVEAAEALVTE
VDATASETSEDQAPTEDEAITVHAAPDEDVSSEQAADEASAPDQPTLLEPASIEPTLLEP
TLIEPAEQPPARADRTPSAPEPPSRAPAATAPEPTPEPASSMPYDDIPLPDEPVDEYEVP
PPDATPARARQPEPESQPEPAVDGGLDVDSVRLRYQDIRAAVRERSKSLEPMLSAAVIAD
VDGTTVVLSHPIEVLVGRLSAPHAVTIIREALTEVFGTELDVRTVHQAPGTAVPSSGGAG
QPATQQAKPRQSFSRPSRARDQGAAPAPAPEPVAEPEEPEPPRADEDIPAEERAEMVADA
RTGSPEQRLDPDLVALELLKSELGARPLE
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
gtggctctgtatcgcacctatcgcccggctaccttcgccgacgtcgtgggtcaggagcac
gtcactgatccgttgagccacgccctcgattccggtcgcatcaaccatgcgtatctgttc
tcgggtccgcgcggttgtggcaagacgtcgtcggcgcgaatcctggctcgctcgctgaac
tgtgtcgagggcccgacgtcgcgcccctgcggcacgtgcacgtcgtgtgtggcgctcgcc
ccgggcggcccgggcaatctcgacgtcatcgaactcgacgctgcgagccatggcggtgtg
gacgacacccgcgagctgcgcgaccgcgccttctacgccccggccgagtcgcgctaccgc
gtgttcatcgtcgacgaggcacacatggtgaccaacgccggcttcaatgcgctgctcaag
atcgtcgaggagccgccggagcacctgatcttcgtcttcgcgacgaccgagccggagaaa
gtgctgcccaccatccggtcgcgcacccatcactatccgttccggttgctcgcgccgccc
gtgatgcggggtttgctggagaagatctgcgagcgcgagggcgtcacggtcgcacccgag
gtgtacccgctggtgatccgcgcgggcggtggctcaccgcgtgactcgctgtcgatcctc
gaccagctgctggccggcgccgacgatcagggtgtcgcctatgaacgcgcgctggccctg
ctcggtgtcaccgacgtcgcgctgatcgacaccgcagtggacgcactcgccgacgccgac
gggtcggcgttgttcggcacggtggagaaggtggtcgacgccgggcacgatcctcggcga
ttcgccgtcgatctgctcgaacggctccgcgatctgattctgctgcaagcggttcccgat
gccgccgaccgcggactggtcgaggcccccggggagcagctcgcacggatgcagtcccag
atcgagaccctcggtccggcgtcgctgactcgcttcgccgagatcgtgcacaacgcactg
ggagagatgcgcggcaccacgtcaccgcggttgctcctcgaggtgatgtgtgcgcggatg
ctgctgcccgcggtctcgtccgacgacgcagcactcctccagcgactcgaacggctggaa
tcggggatcgggaccacgtcgatcccggtcccggcgaaaccggctgagcccgaaccggaa
ccgaagttcctccgtccgtcgcagcgtaaggccatggaagaggccaaggcggcggaagcc
gccaagcaggccgcagcggaggcggccgaggccgacgccgcgccggtgtcgacgccggca
gcaccggccgtcgaggagcaggccccagagaaggttgctgcagagaaggttgctgcggag
aaggttgctgccgaagccgccgagcccgtggcggcgcaggtgccggcggtcgcgtcgatc
gtcgacgagcctgctgccgacgagcccgttgccgctgattccgttgccgccgattccgtt
accgtcgataccgttactgacgaggagatgctcgacgagctcatcgtcgagggaccggcc
ctcgaggacgcggtcgccgaggccgaggcggtcgaggcagccgaggcgctggtcacggag
gtcgacgccaccgcgtcggagacatcggaggaccaagcgccgaccgaggacgaggcgatc
accgtccacgcagcgcccgacgaggacgtttcgtccgaacaggccgccgacgaggcgtct
gcccccgatcagcccacgctgctcgagcccgcatcgatcgagcccacgctgctcgagccc
acgctgatcgagccggccgagcaaccgccggcccgcgccgatcgcacgccctccgccccc
gaaccgccgtcccgcgcgccggcggcgaccgctcccgagccgacgcccgaaccggcgtcg
tcgatgccctacgacgacatcccgcttcccgacgaacccgtcgacgagtacgaggtcccg
ccgccggatgcgacgccggcccgcgctcgccaacccgaaccggagtcacaacccgaaccg
gccgtggatggcggactcgatgtggactcggttcgtctgcgctaccaggacattcgagcc
gcggtgcgggaacgctcgaagagcctcgaaccgatgttgtcggcggccgtcatcgccgac
gtcgacggcacgacggtggtcttgtcgcacccgatcgaggtgctggtcggccggctgtcg
gcgccacatgcggtgaccatcatccgggaggcgctgaccgaggtcttcggtaccgaactc
gacgtccggaccgtgcaccaggcgccgggcactgccgtcccgtcctcgggtggggcgggg
caaccggccacgcagcaggcaaagccgcggcagtcgttctcgcgtccgagtcgcgcgcgc
gaccagggtgccgcgccggcgccggcgcccgaacccgttgccgagccggaggaacccgag
ccgccacgagccgacgaggacatccctgccgaggaacgcgcggagatggtggccgacgca
cgtaccggcagccccgaacagcgtctcgaccccgacctggtcgcgctggagttgctcaag
tcagaactcggggcccggccgctggagtga
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