Gordonia jinghuaiqii: H1R19_09180
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Entry
H1R19_09180 CDS
T07538
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
gji
Gordonia jinghuaiqii
Brite
KEGG Orthology (KO) [BR:
gji00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gji03400
]
H1R19_09180
DNA repair and recombination proteins [BR:
gji03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H1R19_09180
Archaeal homologous recombinant proteins
H1R19_09180
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
QMT03250
UniProt:
A0A7D7RD58
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Position
2057104..2058303
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AA seq
399 aa
AA seq
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MRIVHTSDWHLGRTFHGVELLADQRRALSHLADLVAAESADVVIVAGDVYDRSVPSADAV
RVYDEGLAEIAAAGAQIVVTSGNHDSPTRLGAGSGFAAAGGLHLRTSIDAIADPVILTDT
HGEVAFYGIPYLEPDTARRHLGVQTPGGHTAVLDAAMDRVRADLSARGGRSVVVAHAFVS
GAAASGSERSISVGGVETVPAEVFSGVDYVALGHLHSPQRVTDTVRYSGSLLPYSFGERS
HRKAVLVVDLDAAGVAEVRSHELPVVRALSSLTGTLDDLLTGEQFAVAEDHYVEVTLTDP
LRPTDAMRRLRQRFPFAVHVQWDRPHSGAGVDYRSRVRGRSDAEIIASFIEDVRDAPTKG
ERVLVERALRAVVGEPESDASDGSELALFDLEAIIAESA
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcgtgcacacttccgactggcacctgggccggacgttccatggtgtcgagctg
ctcgccgaccagcgccgcgcgctgtcccacctcgcggatctggtggcggccgagtcggcc
gacgtcgtcatcgtcgccggtgacgtctacgaccggtccgttccctccgccgacgccgtg
cgcgtctacgacgagggactggccgagatcgccgccgccggtgcgcagatcgtggtgacc
tcgggcaatcacgactcaccgacccgcctcggggccggatcgggtttcgcggccgccggc
ggactccatctgcggacctcgatcgatgccatcgccgatccggtgatcctcaccgacacg
cacggtgaggtcgcgttctacggcatcccgtacctcgagccggacaccgcccgacgccat
ctcggggttcagacgcccggcggtcacaccgccgtcctcgatgcggcgatggaccgggta
cgtgccgacctctccgcgcgaggcgggcgctcggtggtcgtggcacatgccttcgtcagt
ggcgccgcggcgtccggatcggaacgctccatcagcgtcggtggagtggaaaccgttccc
gccgaggtcttttccggcgtcgactacgtcgcgctcgggcacctgcactcgccgcagcgg
gtcaccgacaccgtgcgctacagcggatcgttgctgccgtactccttcggcgagcggagt
caccgcaaggcggttctggtcgtcgacctcgatgccgccggagtcgccgaggtccggtca
cacgaactccccgtcgtccgcgcgttgagttcgctgaccggaaccctcgacgacctgctc
accggcgaacagttcgcggtggcagaggatcactacgtcgaggtgacactgaccgacccg
ctccgtccgacggacgccatgcggcgtctgcgtcagcgttttccctttgcggtccatgtg
cagtgggaccgcccgcattccggtgcaggcgtggactatcgctcgcgggtgcggggccgt
tccgacgccgagatcatcgcctcgttcatcgaggacgtccgtgacgccccgaccaagggg
gagcgcgttctcgtcgagcgtgcgttgcgtgccgtcgtcggtgaacccgagtcggatgcg
tcggacggttccgagctggccctgttcgacctcgaggcgatcatcgcggagtccgcgtga
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