Gordonia jinghuaiqii: H1R19_09230
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Entry
H1R19_09230 CDS
T07538
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
gji
Gordonia jinghuaiqii
Pathway
gji03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gji00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H1R19_09230 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gji03021
]
H1R19_09230 (rho)
03019 Messenger RNA biogenesis [BR:
gji03019
]
H1R19_09230 (rho)
Transcription machinery [BR:
gji03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
H1R19_09230 (rho)
Messenger RNA biogenesis [BR:
gji03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
H1R19_09230 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
NACHT
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
QMT03259
UniProt:
A0A7D7LYU9
LinkDB
All DBs
Position
2071220..2073343
Genome browser
AA seq
707 aa
AA seq
DB search
MTDTDLITAPAGQDSAGSAAPDSGQPATKTRARTGLTGMVLSELRTVAGELGIKGTSGMR
KGDLIAAIKERQAGGAAAPAAKTTGSRAKAASAKASTAEEQLTIADSTDTATSDAPKSAS
RAGTRSGTRKAASGDAEAAKGDASNDESVQNDSAKNDSAKNDSAKNDSGQNEPASDDAAK
GGNAASDTDSGDTAGGRERRRRDSSGDASGDTEAGDQRTRRSRNQNREGGQNRDNQNRDG
GQNREGGQNREGGRNRDNQNRDGGQNRDNQNRDGSQNRDGGQNRDDRDDDGEGGGRRRGR
RFRERRRGQNRDTPNEPQVSDDDVLQPVAGILDVLDNYAFVRTSGYLAGPNDVYVSMNLV
RKNGLRRGDAITGAVKVPRDGGDQQQNQRQKFNPLVRLDSVNGGDVEAAKRRPEFNKLTP
LYPNQRLRLETTPDRLDTRVIDLIMPIGKGQRALIVSPPKAGKTTILQDIANAIATNNPE
CHLMVVLVDERPEEVTDMQRSVKGEVIASTFDRPPSDHTSVSELAIERAKRLVESGKDVV
VLLDSITRLGRAYNNASPASGRILSGGVDSTALYPPKRFLGAARNIENGGSLTIIASALV
ETGSTGDTVIFEEFKGTGNAELKLDRKISERRVFPAVDVNLSSTRKDELLLSPEEFAIVH
KLRRLLAGLDSQQAIDLLISQLKKTKTNIEFLMSVQKTAPGGGNNSD
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatacggacctcatcaccgcacctgccgggcaggattccgcgggttcggccgct
cccgactcggggcaaccggccaccaagacacgcgcgcgcaccggcctgaccggcatggtg
ctcagcgaactgaggactgttgccggtgaactcggcatcaagggcacatccggaatgcgc
aagggcgatctgatcgccgccatcaaggagcgccaggccggcggcgctgcggcgcccgcc
gccaagaccaccggcagcagggcaaaggccgcctcggccaaggcctccaccgccgaggag
cagctgaccatcgccgactccaccgacaccgccacgagcgacgcccccaagagtgcgtcg
cgtgccggcacccggagcgggaccaggaaagccgcctcgggtgacgccgaagccgccaag
ggcgacgcctcgaacgacgagagcgtgcagaacgactcggccaagaacgactcggccaag
aacgactcggccaagaacgattcggggcagaacgagcccgcttcggatgacgccgccaag
ggtggcaacgccgcgtcggacaccgattccggggacaccgcaggcgggcgcgaacggcgt
cgacgcgacagctcgggcgacgcgtccggcgacaccgaggccggtgaccagcgcacgcgt
cgtagccgtaaccagaatcgcgagggcggccagaaccgcgacaatcagaatcgcgacggt
ggccagaaccgcgagggtggccagaaccgcgagggcggacgcaatcgcgacaatcagaat
cgcgacggcggccagaaccgcgacaaccagaaccgcgatggcagccagaaccgcgatggt
ggccagaaccgcgatgaccgtgacgacgacggtgaaggcggcggtcgtcgccgtggccgc
aggttccgcgaacggcgccgtggccagaaccgcgacacaccgaacgagccgcaggtctcc
gatgacgacgtgttgcagccggtcgcgggcatcctcgacgtgctcgacaactacgcgttc
gtgcggacctccgggtatctggccggcccgaacgacgtctacgtctcgatgaacctcgtc
cgcaagaacgggctccggcgcggcgacgcgatcaccggtgccgtcaaggtgccccgtgac
ggcggcgatcagcagcagaaccagcgtcagaagttcaacccgctggtccgcctcgactcc
gtcaacggcggcgacgtagaggcggccaagcgccgccccgagttcaacaagctcaccccg
ctgtacccgaatcagcggctgcgcctggagaccacgccggaccggctcgacacccgcgtc
atcgacctcatcatgccgatcggcaagggtcagcgtgcgctgatcgtgtcgccgccgaag
gccggtaagacgacgatcctgcaggacatcgccaacgcgatcgccaccaacaaccccgaa
tgccacctcatggtcgtgctcgtcgacgagcggcccgaggaggtcaccgacatgcagcgt
tcggtgaagggggaggtcatcgcctcgaccttcgaccgtccgccgtcagaccacacctcg
gtgtcggagttggccatcgagcgtgcgaagcggctcgtggagagcggcaaagacgttgtg
gtgctgctggattcgatcacccggctgggacgtgcgtacaacaacgcgtccccggcatcg
ggccgaatcctgtccggcggtgtcgattccaccgcgctgtacccgccgaagcgattcctc
ggtgcggcgcgcaacatcgagaacggcggctcgctgacgatcatcgcgtcggcgctggtc
gagaccggttcgaccggcgacacggtgatcttcgaggagttcaagggcaccggcaacgcc
gagctcaagctcgaccgcaagatctccgagcggcgcgtgttcccggcggtcgacgtgaac
ctgtcgagcacacgtaaggacgagctgttgctgtcgccggaggagttcgccatcgtgcac
aagctgcggcgtctcctcgcgggcctggactcgcagcaggccatcgacctgctgatcagt
cagctgaagaagaccaagacgaacatcgagttcctgatgtcggtgcagaagaccgcaccc
ggcggcggcaacaactccgactag
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integrated database retrieval system
