KEGG   Gordonia jinghuaiqii: H1R19_13180
Entry
H1R19_13180       CDS       T07538                                 
Name
(GenBank) UvrD-helicase domain-containing protein
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
gji  Gordonia jinghuaiqii
Pathway
gji03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:gji00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    H1R19_13180
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gji03400]
    H1R19_13180
Enzymes [BR:gji01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     H1R19_13180
DNA repair and recombination proteins [BR:gji03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     H1R19_13180
SSDB
Motif
Pfam: UvrD-helicase AAA_19 UvrD_C UvrD_C_2 AAA_30 PDDEXK_1 AAA_25 Arg_decarbox_C KdpD DEAD
Other DBs
NCBI-ProteinID: QMS99929
UniProt: A0A7D7R820
LinkDB
Position
complement(2944743..2948171)
AA seq 1142 aa
MRRAGTFDITADLPEHTTVLEASAGTGKTYAIVGLAARHIAEGVPISQMLLVTFSRAATA
ELRERMRERVRELLDALGSSSAAVTASSETGDAGHTEDALLRMLASGSADEVTARRRNLA
RALSDFDASTIATTHTFCNRMLEALGFLGERELVYSIVEEVDDLTEEVALDLYLRGFWAS
DAPEFSFAEARDIARDAVRQASVELAPGESELGEGPAADAVAARRVSFASAVRKIVDTRK
RDARVRTYDDLQAILHRIVTDPVVGERACERIRNTFSVALVDEFQDTDPLQWEILRRCFH
GHRRLILVGDPKQSIYGFRGAEVLSYLAAVSSADTLQALDVNWRSDGALVDALGHVYGDA
ALGHPDIVVHPVAAAFAGSRLDGRPPLRLRAFLRGDFTSLNSYGLPGVKEVRNRIAADVA
DDIADTLSQAARIEDRGASRVVDPGDIAILVRQNNTIEPLQRELAARGINSVIGSGVNVF
STSAAHHWLWVLRALEQPSRPDRVRLAALTALFGWSDERVATAEESELAELGAELSTLAR
VFVQGGFAAMAQRLLDAHGVAARVLAADNGERTLTDLIQVSALCNKHVVETSDGLSALVE
WLTERINDTSTRQRYEDQSRRLDRDTRAVQIMTVHASKGLQFPIVYVPYGWDGTWIGDRG
NITYHDESGTRRLDVGGGQAPGRAARRKRYADEVAGEDLRLLYVALTRAQSQVVAWWAPS
MNTTTGPLHRLIFGRDGATRTPGPAGESVWSVASDVAIPGDDITCVGVLRRLTERDGSIS
IEPAGRIDPGLVVPAFDSENAHAALGVARFRRKIDQEWRRTSYSAIVADVAHGPGDPAAS
VVGTGSEPADDVLADEPVDAPEEPIDEPAGPTERSGMPSLMNGLPFGAAFGTLVHEVLEY
VDTSAADIESHVRELCSHALGALAADIDREVLVAALVGVLTTGLGFGDLWSVKPGDRLAE
LDFELPLGPIDSGESGTEMADGATLGRIADLLEEHLGEDDPLRDYAPHLRAVPGRRLRGF
LTGSIDSVLRTPDGRYVIVDYKTNRIRPGDLVVEDFDTASMAREMIAAHYPLQALLYSVA
LHRYLRWRVPDYDPGRHLGPVQYHFVRGMAGPATPPGCGVFEWAVPASLVIALSDALAGE
AR
NT seq 3429 nt   +upstreamnt  +downstreamnt
atgaggcgggccggtaccttcgacatcaccgccgacctgcccgagcacacgaccgtgctc
gaggcgagcgcgggcaccgggaagacctacgcgatcgtcgggctcgccgcgcggcacatc
gccgagggcgtgcccatctcgcagatgctgctcgtcaccttcagccgagccgcgacggcc
gaactccgcgaacgcatgcgggaacgcgtccgcgaactgctcgacgcgctcggttcgtcc
tcggccgcggtgaccgcatcctctgagacaggggacgccggacacaccgaggacgcgttg
ctgcggatgctggcgagcggatcggccgacgaggtgaccgcgcgcaggcggaatctcgct
cgcgccctgagcgacttcgacgcctcgacgatcgcgaccacgcacaccttctgcaaccgg
atgctcgaggcactcggtttcctcggcgagcgtgaactcgtctactcgatcgtcgaggag
gtcgacgacctgaccgaagaggtcgccctcgacctctaccttcgcggcttctgggcaagc
gacgcaccggaattcagcttcgctgaggcgcgtgacatcgcccgtgacgcggtgcgccag
gcatcggtggagctcgctccgggagagtccgaactcggcgaggggccggccgcggacgcc
gtcgcggcgcgtcgggtcagcttcgcctcagccgtccggaagatcgtcgacacccgcaaa
cgcgatgcacgcgtgcgtacatacgacgacctgcaggcgatcctgcaccggatcgtcacc
gaccccgtcgtcggcgaacgtgcctgcgagcgcattcgcaacaccttctcggtggccctc
gtcgacgaattccaggacaccgacccgctgcagtgggagatcctgcgacgctgcttccac
gggcatcgtcggctcatcctcgtcggcgaccccaaacagtcgatctacgggttccgcggt
gcggaggtcctcagctacctcgccgcggtctcctcggccgacaccctgcaggcactcgac
gtcaactggcgctccgacggcgcactcgtggacgccctcggccacgtgtacggcgatgcg
gcgctgggacatcccgacatcgtcgtgcatccggtggcggcagccttcgccggcagtcgt
ctcgacggccggcccccgctgcgcctgcgtgccttcctgcgcggtgacttcacctcgctg
aattcctacgggctgcccggggtcaaagaggtccgcaaccgcatcgcggccgacgtcgcc
gacgacatcgccgacaccctgagtcaggccgcgcgcatcgaggaccgcggggcatcacgc
gtggtcgaccccggcgacatcgcaatcctcgtgcggcagaacaacaccatcgaaccgctg
caacgtgaactggccgcacgcgggatcaactcggtcatcggctccggtgtcaacgtgttc
tcgacgagcgcggcgcaccactggctgtgggtgttgcgcgccctcgaacaaccctcgcgt
cccgaccgggtccgcctggccgcactgacggcgttgttcggatggtccgacgagcgggtg
gcgaccgccgaggagtccgagctcgccgagctcggtgccgaattgtccacgctggccagg
gtgttcgtgcaaggcgggttcgccgcgatggcacagcggcttctcgacgcgcacggggtg
gcggcacgggtgttggccgccgacaacggcgaacgtacgctcaccgatctgatccaggtg
tcggcgctgtgcaacaagcacgtcgtggagacctcggacgggctcagcgccctggtcgaa
tggctgaccgagcggatcaacgacacgtccacgcggcagcggtacgaggatcagagccga
cgcctcgaccgtgacacgcgggccgtccagatcatgacggtgcacgccagcaaaggactg
cagttcccgatcgtctacgtcccctacggctgggacggcacgtggatcggtgaccgcggc
aacatcacctaccacgacgagtcgggaacgcggcgcctcgacgtcggcgggggacaggca
cccggacgtgcggcgcgacgcaagcggtacgccgacgaggtcgccggtgaggacctccga
ctgctctacgtcgcgctcacgcgtgcccaatcgcaggtcgtcgcatggtgggcgccgtcg
atgaacaccaccaccggaccactgcaccggctgatcttcggtcgcgacggcgcgacccgc
acacccggccccgccggcgaatcggtgtggtcggtcgcctccgatgtcgcgatccccggc
gacgacatcacctgcgtgggtgtcctgcggaggctgaccgaacgcgacggctcgatctcg
atcgagccggcgggacgtatcgaccccggtctggtggtacccgcattcgattccgagaac
gcccatgcggcgctcggggtggcccgcttccgccggaagatcgatcaggagtggcgtcgg
acgtcgtactcggcgatcgtcgccgacgtcgcgcacggccccggcgacccggcggcgtcc
gtcgtcgggaccggtagtgaacccgcggacgacgtcctggccgatgaaccggtggacgcg
cccgaggagccgatcgatgagccggccggcccgaccgaacgttccggcatgccgtcgctg
atgaacggactgcctttcggtgcggccttcggcaccctcgtgcacgaggttctcgagtat
gtcgacacctccgccgccgacatcgaatcccatgtgcgcgaactgtgttcacacgcgctc
ggtgcgctggccgccgacatcgaccgggaggtgctggtggccgcgctggtcggtgtgctc
accaccggactgggtttcggtgacctgtggagtgtcaagccgggcgaccgtctggccgag
ctcgacttcgaactcccgctcggacccatcgattcgggcgagagcggaaccgagatggcc
gacggcgcgaccctcggacgaatcgccgaccttctggaagagcatctgggggaggatgat
ccgctccgcgactacgcaccccacctgcgggcggtgcccggtcgtcggctccgcggattc
ctcaccggcagcatcgattcggtcctgcgaacgcccgacgggcgctacgtgatcgtcgac
tacaagaccaaccgcatccgtcccggcgatctggtcgtcgaggacttcgacaccgcgtcg
atggcccgagagatgatcgccgcacactatccgctgcaggcgttgctgtattcggttgca
ctgcaccggtatctgcgatggcgggtcccggactacgatcccggccgccacctgggaccg
gtgcaataccacttcgttcgcgggatggccgggccggcgaccccgccagggtgcggtgtc
ttcgaatgggcggtgccggcgtcgctggtgatcgccctgtccgacgcgcttgccggggag
gcacgatga

DBGET integrated database retrieval system