Gordonia jinghuaiqii: H1R19_13360
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Entry
H1R19_13360 CDS
T07538
Name
(GenBank) mismatch-specific DNA-glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
gji
Gordonia jinghuaiqii
Pathway
gji03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gji00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H1R19_13360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gji03400
]
H1R19_13360
Enzymes [BR:
gji01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
H1R19_13360
DNA repair and recombination proteins [BR:
gji03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
H1R19_13360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
2-Hacid_dh
Motif
Other DBs
NCBI-ProteinID:
QMS99960
UniProt:
A0A7D7LRW2
LinkDB
All DBs
Position
complement(2985802..2986365)
Genome browser
AA seq
187 aa
AA seq
DB search
MGFTRDELLGYRDRTVADLVGDDCRLLFVGINPGLWTAATGAHFARPGNRFYPALARAGI
VDHVIDASTGMSDADRKALLERGVGITNVVARATATAAELTAQELRDGGVRLRERVRAIG
PRVVAVAGITAYRSAFGRRDAVTGRQDETWDGAQLWVVPNPSGLNAHETVDSLATAYREA
AVAAGVV
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
gtgggtttcacgcgggacgaacttctcggctaccgggaccgcaccgttgccgacctcgtc
ggcgacgattgccgcctgctgttcgtgggcatcaaccccggcctgtggaccgcggcgacg
ggcgcccatttcgcccggcccggtaaccgcttctatcccgctctcgcccgcgccgggatc
gtcgaccatgtgatcgacgcatcgaccggaatgtccgacgccgaccggaaagcactgctc
gaacgcggcgtcggcatcaccaatgtcgtggcgcgagcgactgccaccgccgcggagctc
accgcacaggagctccgtgacggtggcgtccggctgcgtgagcgggtgcgtgcgatcggc
cccagggtcgtcgcggtcgcggggataaccgcctaccgcagcgcgttcggacgccgcgac
gccgtgacgggacggcaggacgagacgtgggacggcgcgcagttgtgggtggtcccgaac
cccagcggactcaacgcccacgagacggtcgactccctcgccacggcctaccgtgaggcg
gcggttgcggcaggcgtcgtgtga
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