Gordonia jinghuaiqii: H1R19_15600
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Entry
H1R19_15600 CDS
T07538
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
gji
Gordonia jinghuaiqii
Brite
KEGG Orthology (KO) [BR:
gji00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gji03032
]
H1R19_15600
03036 Chromosome and associated proteins [BR:
gji03036
]
H1R19_15600
03400 DNA repair and recombination proteins [BR:
gji03400
]
H1R19_15600
DNA replication proteins [BR:
gji03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
H1R19_15600
Chromosome and associated proteins [BR:
gji03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
H1R19_15600
DNA repair and recombination proteins [BR:
gji03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
H1R19_15600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
HC2
Motif
Other DBs
NCBI-ProteinID:
QMT00335
UniProt:
A0A7D7LTN1
LinkDB
All DBs
Position
complement(3498728..3499354)
Genome browser
AA seq
208 aa
AA seq
DB search
MNKAELIDELTKKLDADRKTATEAVELVVDTIVRAVNKGESVTITGFGVFEKRKRAPRVA
RNPRTGETVKVRATSVPAFRPGAQFKAVVAGKQKLAATGPAVKRGSGTTTTAAKKAAPAK
KTAAKKATPAKKTAAKKAPAKTTAAKKATPAKKTTAAKKATPAKKTTAAKKATPAKKAAP
AKKATAAKKAPAKKTAAKKAPAKKATRR
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggcggagctcattgatgagctgaccaagaagctcgacgcggatcgcaagact
gcgacagaagccgtcgagctcgtcgtcgacacgatcgtgcgcgcggtcaacaagggcgag
agcgtgacgatcaccggcttcggcgtattcgaaaagcggaagcgcgcaccgcgcgtcgct
cgcaacccgcgcaccggcgagaccgtgaaggtccgcgccacgtcggtcccggcgttccgt
ccgggcgcgcagttcaaggccgtcgtggccggcaagcagaagctcgccgcgaccggtccg
gctgtgaagcgcggtagcggcacgaccaccacggcggcgaagaaggctgcaccggccaag
aagaccgcggccaagaaggccaccccggccaagaagaccgcggccaagaaggctccggcg
aagaccaccgcggccaagaaggccacgccggccaagaagaccacggcggccaagaaggcc
accccggccaagaagaccacggcggcaaagaaggccaccccggccaagaaggcggctccg
gcaaagaaggccaccgcggcaaagaaggctccggccaagaagactgcggcaaagaaggct
ccggccaagaaggccactcgccgctga
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integrated database retrieval system
