Gordonia jinghuaiqii: H1R19_17360
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Entry
H1R19_17360 CDS
T07538
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
gji
Gordonia jinghuaiqii
Pathway
gji03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gji00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
H1R19_17360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gji03021
]
H1R19_17360
03400 DNA repair and recombination proteins [BR:
gji03400
]
H1R19_17360
Enzymes [BR:
gji01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
H1R19_17360
Transcription machinery [BR:
gji03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
H1R19_17360
DNA repair and recombination proteins [BR:
gji03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
H1R19_17360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
QMT00645
UniProt:
A0A7D7LQ93
LinkDB
All DBs
Position
complement(3870154..3871206)
Genome browser
AA seq
350 aa
AA seq
DB search
MLISQRPTLTEEVIAEDRSKFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAITSIRIDGVL
HEFTTVAGVKEDVTDIILNLKGLVVSSDEDEPVTMYVRKQGPGTVTGADIVPPAGVTVHN
PDLHIATLNDKGKLEIELVVERGRGYVPAVQNKASGAEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDRLVLDVETKNSISARDALASAGKTLVELFGLARELNVEAEGIEIGPSPAE
ADHIASFSLPIEDLELTVRSYNCLKREGVHTVGELVARTESDLLDIRNFGQKSIDEVKVK
LHALGLSLKDSPASFDPSQVAGYDPATGTWSEDASFDADSGEDFAETEQL
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgctcatctcacagcgacccaccctcaccgaggaagtcatcgccgaggaccggtcgaag
ttcgtcatcgaacccctcgagccgggcttcggttacaccctcggcaactcgctgcgtcgt
accctgctcagctcgatcccgggtgccgccatcaccagcatccgcatcgacggtgtcctg
cacgagttcaccaccgtggccggggtcaaggaagacgtcaccgacatcatcctgaacctc
aagggcctcgtggtcagctccgacgaggacgagccggtcaccatgtacgtgcgcaagcag
ggtccgggcaccgtcaccggcgccgacatcgtgccgccggccggtgtcaccgtgcacaac
cccgatctgcacatcgccaccctgaacgacaagggcaagctcgagatcgagctcgtcgtc
gagcggggccgcggctacgtcccggccgtgcagaacaaggcgtcgggtgccgagatcggc
cgtatcccggtcgactcgatctactcgccggtgctcaaggtgacctacaaggtcgaggcg
acccgtgtcgagcagcgcaccgacttcgatcggctcgtgctcgacgtcgagaccaagaac
tcgatcagtgcgcgtgacgcgctggcatcggcgggcaagaccctggtggagctgttcggg
ctcgcccgggagctcaacgtcgaggccgagggcatcgagatcgggccgtcgccggccgag
gccgaccacatcgcctcgttcagcctgccgatcgaggatctggagctgacggttcgttcc
tacaactgcctcaagcgcgagggtgttcacaccgtcggcgagctggttgcccggaccgag
tcggatctgctcgacatccgcaacttcggtcagaagtcgatcgatgaggtcaaggtcaag
ctgcatgcgctcggtctgtccctcaaggacagcccggccagcttcgatccgtcgcaggtc
gcgggttacgacccggccaccggcacgtggtcggaagacgcgtccttcgacgccgattcc
ggtgaggatttcgcggagaccgagcagctctag
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