Gordonia jinghuaiqii: H1R19_19040
Help
Entry
H1R19_19040 CDS
T07538
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
gji
Gordonia jinghuaiqii
Pathway
gji00550
Peptidoglycan biosynthesis
gji01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gji00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
H1R19_19040 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gji01002
]
H1R19_19040 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gji01011
]
H1R19_19040 (dacB)
Enzymes [BR:
gji01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
H1R19_19040 (dacB)
Peptidases and inhibitors [BR:
gji01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
H1R19_19040 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
gji01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
H1R19_19040 (dacB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_S13
Peptidase_S11
Motif
Other DBs
NCBI-ProteinID:
QMT00943
UniProt:
A0A7D7LQN8
LinkDB
All DBs
Position
complement(4273814..4275280)
Genome browser
AA seq
488 aa
AA seq
DB search
MPSGSPPTVQRERPGGFVGAPTRPASTSAASTSTGGRRGRKLLWWTIAAVVILALASTAA
VVVALRVDRDPALPPGIPPQPAAIAVDPLIDPVAATAPAPTPTGVIRAITPALRDPALGE
LTGMITDSLTGQVLWTRNPQRPRIPASNAKVLSAAAFLDAMPHDQRLTTTVIAGADGQVI
LRGAGDPTLSAQPADADTFYTDPARIADLADQIRRTELPVTSVAVDLGAFSGPTMDSTWD
RRDITGGDIAPIESLMIDGARLEPLDEYSPRSPTPGIMAGEALAAALGVDGPVTETTAPT
GDRVIAEVESAPLVTRVNDMLRHSDNVLAESLAVELSVYRGGPPTHAGGVDAVEQVLSSM
FPEQWPGTTLRDASGISYANRTTPALLDAVMTAASGPGKPALRPMLDGLPIAAGTGTLAD
RFGATNPGAGWVRAKTGTLTGVSSLTGIVQTIDGRVLSFALMSGGTSPADARPALDAVVG
QLRECGCR
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcgggtcgccaccgaccgtgcagcgcgagagacccggaggctttgtgggcgca
ccgaccagacccgcatcgacgagcgccgcatcgacgagcaccgggggtcgccgcggtcgg
aaactcctgtggtggacgatcgccgccgtggtgatcctggcgctggcctcgaccgccgcg
gtcgtcgtcgccctacgggtggaccgcgaccccgcactgccgccgggaatcccgccgcag
cccgccgcgatcgccgtcgacccgctgatcgacccggtggccgccaccgcacctgcgccg
accccgaccggggtgatccgcgccatcacgcccgccctgcgcgatcccgcgctgggggag
ctgaccggaatgatcaccgattcgctgaccggccaggtcctgtggacgcgcaacccgcaa
cggccacgcatcccggcgtcgaacgccaaggtcctctccgccgcggccttcctcgatgcg
atgccgcacgaccagcgactgacgacgacggtgatcgccggtgccgacggacaggtgatc
ctgcggggcgcgggcgatccgacgctgtcggcgcaacccgccgacgccgacactttctac
accgaccccgcccgcatcgccgacctcgccgaccagatcaggcggaccgagctcccggtg
acgtcggtggcggtggatctgggtgccttctccgggccgacgatggacagcacctgggat
cggcgcgacatcaccggcggcgacatcgcccccatcgaatcgttgatgatcgacggcgcc
cgcctcgaaccgctcgacgaatactcgccgcgcagtccgacgccgggcatcatggccggt
gaggcgctcgccgccgccctcggcgtcgacgggccggtcaccgagacgaccgctcccacc
ggcgaccgcgtcatcgccgaagtcgagtccgcacccctggtcaccagggtcaacgacatg
ttgcgccacagcgacaacgtgctggccgagtcgctcgccgtcgaactgtcggtgtaccgc
ggtggtccgccgacccacgcgggcggggtcgatgccgtcgagcaggtgttgtcctcgatg
ttccccgagcagtggcccggcaccaccctgcgcgacgcctcgggtatctcctacgccaac
cgcaccacacccgcgctgctcgacgcggtcatgacggcggccagcggaccgggcaaaccc
gccctgcggccgatgctcgacgggctgccgatcgcggccggcaccggcaccctggccgac
cggttcggcgccaccaaccccggcgcgggctgggtgcgggccaagaccggaacactcacc
ggggtcagttcgttgacgggcatagtccaaacgatcgacggccgcgtgctgtcgttcgcc
ctgatgtccggcggcacctcaccggcggacgcgagacccgccctcgacgccgtggtgggt
caactgagagagtgcgggtgccgatga
DBGET
integrated database retrieval system
