Gluconobacter japonicus: ACQW08_12470
Help
Entry
ACQW08_12470 CDS
T11484
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
gjo Gluconobacter japonicus
Pathway
gjo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gjo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACQW08_12470 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gjo03021
]
ACQW08_12470 (rho)
03019 Messenger RNA biogenesis [BR:
gjo03019
]
ACQW08_12470 (rho)
Transcription machinery [BR:
gjo03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ACQW08_12470 (rho)
Messenger RNA biogenesis [BR:
gjo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACQW08_12470 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
OB_RNB
AAA_22
AAA
S1CSD-TOTE-2
NACHT
Fungal_virus_P2_C
DUF6360
Motif
Other DBs
NCBI-ProteinID:
XTV41712
LinkDB
All DBs
Position
2627736..2629037
Genome browser
AA seq
433 aa
AA seq
DB search
MHLAELKKKSPADLLAYAEELEIENVSSMRKQDIMFAILKTLAERDQAIYGEGTLEILPD
GFGFLRSPEANYLPGPDDIYISPTQVRRFGLRPGDTVEGQIRAPRDGERYFALLKVNTIN
FEDPDVVRTRINFDNLTPLYPERRLKMEVEQSEPAVSETSPRSKGKKDQRDYTPRVIDLV
TPIGMGQRALIVAPPRTGKTVMLQSIAASISANHPEVFLIVLLIDERPEEVTDMARSVRG
EVVSSTFDEPATRHVQVTEMVLEKAKRLVEHKRDVVILLDSITRLARAYNTVVPSSGKVL
TGGVDANALQRPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNAELIL
DRKLADKRTFPAIDITKSGTRKEELLVDRAELSKMWVLRRILAPMGTMDAMDFLLDKLKY
SKSNHDFFEAMNN
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgcatctcgccgaactcaagaaaaaatctccggccgatctgctggcttatgcagaggaa
ctggagatcgagaacgtctcgtccatgcgcaagcaggacatcatgtttgctatcctcaag
acccttgccgagcgcgatcaggcgatctacggcgagggaacactggaaatcctgccggat
ggttttggtttcctgcggagcccggaagcaaattaccttcccggcccagacgatatctac
atttccccgacgcaggtccgccgtttcggtctgcgccccggtgatacggttgaaggccag
atccgcgccccgcgggatggcgagcgttacttcgcgctcctcaaggtcaacaccatcaac
ttcgaagacccggacgtcgtccggacgcgtatcaacttcgataacctgacgccgctctac
cctgagcgtcgcctgaagatggaagttgaacagtccgaacctgctgtttccgagacatct
cctcgcagcaagggcaagaaagaccagcgcgattacacaccgcgtgtcatcgaccttgtc
acgccgatcggcatgggccagcgcgccctgatcgtcgctccgccgcgtacgggtaagacc
gtgatgctccagagcatcgcagcctcaatctcagcaaaccatccggaagttttcctgatc
gttcttctgatcgacgaacgtccggaagaagtaacggacatggcccgctccgtgcgcggt
gaagtcgtttcctccaccttcgatgaaccggcaacacgccacgttcaggtcacggagatg
gttctcgaaaaggctaaacgtctcgttgagcacaagcgggacgtggtgatcctcctggat
tccattacccgtctggcccgcgcctacaacaccgttgtgccatcatcaggcaaggtactg
accggcggtgtggacgccaacgctctgcagcgcccgaagcgcttcttcggtgcagcccgt
aacatcgaagaaggtggctcgctcaccatcatcgctacggcgctgatcgataccggttcg
cgtatggacgaagtgatttttgaagagttcaagggcaccggtaacgctgaactcatcctg
gatcgcaaactggctgacaagcgtaccttccctgctatcgacatcaccaagtcgggcacg
cgtaaggaagaactgctggttgaccgtgctgaactgtccaagatgtgggtcctgcgccgt
atcctcgcaccgatgggcacgatggatgccatggacttcctgctggacaagctgaaatac
agcaaatccaaccacgacttctttgaagccatgaataactga
DBGET
integrated database retrieval system
