KEGG   Gilvimarinus japonicus: R50076_02490
Entry
R50076_02490      CDS       T10758                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
gjp  Gilvimarinus japonicus
Pathway
gjp00300  Lysine biosynthesis
gjp00470  D-Amino acid metabolism
gjp01100  Metabolic pathways
gjp01110  Biosynthesis of secondary metabolites
gjp01120  Microbial metabolism in diverse environments
gjp01230  Biosynthesis of amino acids
Module
gjp_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:gjp00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    R50076_02490 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    R50076_02490 (dapF)
Enzymes [BR:gjp01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     R50076_02490 (dapF)
SSDB
Motif
Pfam: DAP_epimerase Draxin
Other DBs
NCBI-ProteinID: BFM19200
LinkDB
Position
complement(293861..294691)
AA seq 276 aa
MRLRFTKMHGLGNDFVVIDGISQKIRLSADKVRALADRNFGIGCDQLLLVEVPTSPDVDF
CYRIFNADGTEVENCGNGARCFARFVRDRRLTGKNVIRVQTASGVMVLTVDENDNVSVDM
GVPVLEPAEIPFTADNRAVVYPLTVGDHDISVSAVSMGNPHAVYVVDDVDSAPVESLGPQ
IESHPRFPRRVNAGFMQVINSGAIKLRVYERGAGETLACGTGACAAVVAGRLRGILDDNV
DVELPGGHLNIQWAGEGQPVIMIGPATSVFHGQVKI
NT seq 831 nt   +upstreamnt  +downstreamnt
atgcgattgcggtttactaaaatgcacggccttggcaacgactttgttgtcatcgacggc
atcagccagaaaatacgccttagcgccgacaaggtgcgagcgctggccgaccgcaacttt
ggtatcggttgcgatcaactgctgctggtcgaagtgcccacctcacccgatgtggatttt
tgctatcgcatctttaacgccgacggcaccgaagtcgaaaactgcggcaacggcgcgcgc
tgctttgcccgctttgtgcgcgatcgccgcctgaccgggaaaaatgttattcgggtgcaa
accgcttcgggcgttatggttctcaccgtcgatgaaaatgacaacgtcagcgtcgacatg
ggcgtgccagtgctggagcctgccgagatcccatttaccgccgacaatcgcgcggtggtt
taccctcttacggtgggcgatcacgacatcagtgtatcggcggtctccatgggcaacccc
cacgcggtatacgtagtcgatgacgtcgacagcgcaccggtagagagcctgggcccgcaa
atagagtctcatccgcgttttccccgccgggttaacgccggctttatgcaagtaataaac
tcgggcgccatcaaactgcgcgtttacgagcgcggcgcgggcgagaccctcgcctgtggc
actggcgcttgtgccgccgtcgtcgccggccggctgcggggcatattagatgacaacgtc
gatgtcgagctgcccggcggtcacctaaacattcagtgggccggagaaggccaaccggtc
attatgatcggccccgcgaccagtgtatttcacggacaggtcaaaatttaa

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