Entry |
|
Symbol |
dapF
|
Name |
(GenBank) diaminopimelate epimerase
|
KO |
|
Organism |
gjp Gilvimarinus japonicus
|
Pathway |
gjp01110 | Biosynthesis of secondary metabolites |
gjp01120 | Microbial metabolism in diverse environments |
|
Module |
gjp_M00016 | Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine |
|
Brite |
KEGG Orthology (KO) [BR:gjp00001]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
R50076_02490 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
R50076_02490 (dapF)
Enzymes [BR:gjp01000]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
R50076_02490 (dapF)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(293861..294691)
|
AA seq |
276 aa
MRLRFTKMHGLGNDFVVIDGISQKIRLSADKVRALADRNFGIGCDQLLLVEVPTSPDVDF
CYRIFNADGTEVENCGNGARCFARFVRDRRLTGKNVIRVQTASGVMVLTVDENDNVSVDM
GVPVLEPAEIPFTADNRAVVYPLTVGDHDISVSAVSMGNPHAVYVVDDVDSAPVESLGPQ
IESHPRFPRRVNAGFMQVINSGAIKLRVYERGAGETLACGTGACAAVVAGRLRGILDDNV
DVELPGGHLNIQWAGEGQPVIMIGPATSVFHGQVKI |
NT seq |
831 nt +upstreamnt +downstreamnt
atgcgattgcggtttactaaaatgcacggccttggcaacgactttgttgtcatcgacggc
atcagccagaaaatacgccttagcgccgacaaggtgcgagcgctggccgaccgcaacttt
ggtatcggttgcgatcaactgctgctggtcgaagtgcccacctcacccgatgtggatttt
tgctatcgcatctttaacgccgacggcaccgaagtcgaaaactgcggcaacggcgcgcgc
tgctttgcccgctttgtgcgcgatcgccgcctgaccgggaaaaatgttattcgggtgcaa
accgcttcgggcgttatggttctcaccgtcgatgaaaatgacaacgtcagcgtcgacatg
ggcgtgccagtgctggagcctgccgagatcccatttaccgccgacaatcgcgcggtggtt
taccctcttacggtgggcgatcacgacatcagtgtatcggcggtctccatgggcaacccc
cacgcggtatacgtagtcgatgacgtcgacagcgcaccggtagagagcctgggcccgcaa
atagagtctcatccgcgttttccccgccgggttaacgccggctttatgcaagtaataaac
tcgggcgccatcaaactgcgcgtttacgagcgcggcgcgggcgagaccctcgcctgtggc
actggcgcttgtgccgccgtcgtcgccggccggctgcggggcatattagatgacaacgtc
gatgtcgagctgcccggcggtcacctaaacattcagtgggccggagaaggccaaccggtc
attatgatcggccccgcgaccagtgtatttcacggacaggtcaaaatttaa |