Gilvimarinus japonicus: R50076_02500
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Entry
R50076_02500 CDS
T10758
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
gjp Gilvimarinus japonicus
Pathway
gjp00300
Lysine biosynthesis
gjp00470
D-Amino acid metabolism
gjp01100
Metabolic pathways
gjp01110
Biosynthesis of secondary metabolites
gjp01120
Microbial metabolism in diverse environments
gjp01230
Biosynthesis of amino acids
Module
gjp_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gjp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
R50076_02500 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
R50076_02500 (lysA)
Enzymes [BR:
gjp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
R50076_02500 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BFM19201
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Position
complement(294769..296016)
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AA seq
415 aa
AA seq
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MSFFTERSAELYAEDMRLSDIAEQYGTPAYVYSRAAFTQHYLAYAQALGQHPGMICYAVK
ANSNIALLNLLARLGAGFDIVSGGELERVLTAGGDPKRIVFSGVGKTAAEMAKALAVGIH
CFNVESEAELELLSQVAAEKSQIARVSLRVNPDVDAKTHPYISTGLKENKFGIDINRAPE
VYRRAAELPNIDIQGIDCHIGSQLTELDPFLDALDRLLVLVDNLSADGIQISHLDLGGGL
GVTYRDEQPPEVATYMEAIKAKIGDRELALMFEPGRSIAANAGVLLTKVLYLKPTEAHNF
AIIDAAMNDNIRPALYQAWQDIRQLAPSKAQTKRWDLVGPVCETGDFLGKDRDLALAPGD
YLAVMSAGAYGFTMSSNYNTRARAVEILVDGDQVHVIRERESFVDMIRGEHIVEQ
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtctttttttaccgagcgcagcgcagagctgtacgctgaggatatgcgtttaagcgac
atcgccgagcaatatggcacccctgcgtacgtttatagccgcgcggcctttacccagcac
tacttagcctatgcccaggcgctgggccagcaccccggcatgatttgctacgccgtaaaa
gccaactctaatatcgccctactcaacctgttggcacgcttaggcgccggctttgatatc
gtctcgggaggcgagctagagcgggtactgaccgccggcggcgaccccaagcgcattgtc
ttctcgggcgtgggtaaaaccgccgccgagatggccaaagcactggcggtgggcattcac
tgctttaatgtcgagtccgaggcggagctagagctgctaagccaggtcgccgcagagaag
agccaaatcgcacgggtatccctgcgtgttaacccggacgtggacgccaaaacccacccg
tatatctccaccgggctcaaagagaacaagtttggcatcgatattaaccgcgcccccgag
gtatatcgccgcgcggccgagctgcccaacattgatatccagggcatcgactgccatatc
ggctcgcagttaaccgagctggacccgtttttggatgccctcgaccggttactggtgctg
gtggataacctcagcgccgatggcattcagattagccacttagatttgggcggcggcctg
ggcgtcacctaccgcgacgagcagccacccgaggtggcgacttatatggaggccattaaa
gccaaaatcggtgaccgcgaactggcgctgatgtttgagccgggccgctcgattgccgcc
aatgccggggtattgctgaccaaagtgctctacctaaagcccaccgaggcgcacaacttt
gccattatcgacgccgccatgaacgacaatatccgcccggcgctgtaccaagcctggcaa
gacattcgccaactggcgccctctaaagcccagaccaagcgttgggacttagtcggcccg
gtgtgcgaaaccggcgactttttaggcaaagatcgcgatttagccctcgcccccggcgat
tacctcgcggtgatgtccgccggcgcctacggctttaccatgagctcgaactacaacact
cgcgcccgcgcggtggagatcttggtggacggcgaccaagtccacgtaatccgcgagcgc
gagagctttgtcgatatgattcgcggcgagcatatcgtcgagcaatag
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