KEGG   Gilvimarinus japonicus: R50076_06850
Entry
R50076_06850      CDS       T10758                                 
Symbol
vgrG1b_2
Name
(GenBank) type VI secretion system spike protein VgrG1b
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
gjp  Gilvimarinus japonicus
Pathway
gjp03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:gjp00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    R50076_06850 (vgrG1b_2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:gjp02044]
    R50076_06850 (vgrG1b_2)
Secretion system [BR:gjp02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   R50076_06850 (vgrG1b_2)
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Gp5_C Phage_base_V DUF6484 DUF2345
Other DBs
NCBI-ProteinID: BFM19636
LinkDB
Position
complement(809379..811661)
AA seq 760 aa
MERIYNLISPLDAEQLRFSALQGRESLSQLFQFDLTLTSPSGDITPADLLGQPLTLEVAL
ADGGTRHLNGQCTEFQSLGKHGRQYLYRARLRPWLWYATQRQDYRIFQNSSVPDMVKQVL
AAYPFECRFNLCGRYRHWEYCVQYRESDANFVMRLLEHEGIWFYFEHSASGHTLVMTDDI
GLASPAPAYASLPFQEAGATEPNKDFIDRWHGAGSVTSGSYQARDYNFEQASALLDTQRA
QPANHPFGKLDVFDYPGSYPHVDDGDGYAKVRVEELRSPHQRSYGKASARGIAPGYLLTL
EQHPQAHHNQEYLMVACDYDFQANDYEADTGAAPFVMQVQFEAHASHEPYRPARLTRKPL
THGPDSAVVSGPAGEEIYTDEHGRVKVHFHWDRYSGRDQNSSCWIRVSHPWAGAGFGGIH
VPRIGQEVLVDYLNGDPDRPVITSRVYNNLQPAPWSLPANATQSGFLTRSTPAGTWEQAN
AFRFEDKIGQEQIWLHAQKNQDIEVNNDETHWVGNDRTKTIDRDETTQVKRDRTETVDGN
ETITVHKTRTEEVDGDETITLHSNRQERVDKNETISIGDNRTEDVGKNESITVGDNRHKT
IGKNETDHIGKSWSINVGDNKNETIAKASMQNVGLARMDNVGAAYSLNVGAAMNTIVGLS
NSEQTGYSKSVTVGQSQTTTVGTTDTTTVGEEFSLTAGGAANITMNADSITLTVGDASLE
MTSDGTLSINGQEITIHAKGEQTLKADGNLTLKGDKILEN
NT seq 2283 nt   +upstreamnt  +downstreamnt
atggaacgcatatacaacctcatcagcccgctggacgccgagcaactgcgctttagcgca
ctgcaagggcgcgagtcactctcgcaactgtttcagtttgacctgacgttaaccagcccc
agcggcgacatcaccccggccgacttactcggccagcctctcacccttgaggtggctctg
gccgacggcggtacgcgccacctaaacggccagtgcaccgagtttcaaagcctgggcaaa
cacggccgccagtacctttaccgtgcgcgcctgcgcccgtggttgtggtacgccacccaa
cgccaggactaccgcatttttcaaaactcaagcgtgcccgacatggtcaaacaagtgctg
gccgcctacccgtttgagtgtcgctttaacctgtgcggccgctaccgccactgggagtac
tgcgtgcagtaccgcgagagcgacgctaactttgtgatgcgcctgctcgagcacgagggc
atttggttttactttgagcacagtgccagcggccacacgttagtgatgaccgacgacatc
ggcttggccagcccggcaccggcgtacgctagcttgccgtttcaggaggccggcgccacc
gaacccaataaagactttatcgaccgctggcacggcgccggcagcgttacctcgggcagt
tatcaagcgcgtgactacaactttgagcaagccagcgccttgctcgacacccagcgcgca
caacccgccaaccatccgtttggcaaactcgatgtgtttgactacccgggcagctacccc
cacgtggatgacggcgacggctacgccaaagtgcgcgtcgaagagctgcgcagcccccac
cagcgcagctatggcaaggcctcggcgcgcggcattgcgcccggctacctactcaccctg
gagcagcacccgcaggcgcaccacaaccaagagtatttaatggtcgcttgcgactacgac
tttcaggccaacgattacgaagccgataccggcgccgcaccgtttgtgatgcaagtacaa
tttgaggcacatgccagccacgagccctaccgccccgcgcgcctcacccgcaaacccctt
acccacggccccgacagcgccgtggtcagcggccccgcgggcgaagagatttacaccgac
gagcacggccgggttaaagtccactttcactgggatcgctacagcggccgcgaccaaaac
agctcctgctggattcgtgtctcgcacccctgggccggcgccggctttggtggtattcac
gtaccgcgtatcggccaagaggtcttggtggattacctaaacggcgaccccgatcgcccc
gtgattaccagccgtgtgtacaacaacctgcaaccggcgccctggtcgctgccggccaac
gccacccagtcgggctttttaacccgctcaacgcccgccggcacctgggagcaagccaac
gcctttcgctttgaagacaaaatcggccaggagcaaatctggctgcacgcgcaaaaaaat
caagacatcgaagtcaacaacgacgaaacccactgggtggggaacgatcgcaccaaaacc
atcgaccgcgatgaaaccacccaggtaaaacgcgaccgaaccgaaaccgtcgatggcaac
gaaaccatcaccgtgcacaaaacccgcaccgaagaagtcgacggcgatgaaaccatcacc
ctgcacagcaaccgccaagagcgcgtcgataaaaacgaaaccatcagcatcggcgacaac
cgcaccgaggatgtgggtaaaaacgagagtattacggtcggcgataaccgccataaaacc
attggtaaaaacgagaccgatcacatcggcaaaagctggtcgattaacgtcggcgacaac
aaaaacgaaaccattgccaaggccagcatgcaaaacgtcggcttagcgcgcatggacaac
gtcggtgccgcctacagcctaaacgtcggcgccgccatgaacaccatcgtcggcctcagc
aactcagagcaaaccggctacagcaaaagcgtcaccgtcggccaaagccaaaccaccacc
gtgggcaccaccgacaccaccaccgtaggtgaggaatttagcctaaccgctggcggcgct
gccaacatcaccatgaacgcggacagtattaccctaacggtgggcgatgcgagtttagag
atgacgagtgatgggacgcttagcattaatggccaagaaatcaccattcacgccaaaggc
gagcaaaccttaaaagccgatggcaacttaacgttaaaaggggacaaaatccttgaaaac
tga

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