KEGG   Gilvimarinus japonicus: R50076_07030
Entry
R50076_07030      CDS       T10758                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
gjp  Gilvimarinus japonicus
Pathway
gjp03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:gjp00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    R50076_07030 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:gjp02044]
    R50076_07030 (tssM)
Secretion system [BR:gjp02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   R50076_07030 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical
Other DBs
NCBI-ProteinID: BFM19654
LinkDB
Position
832539..835859
AA seq 1106 aa
MAKLKPEGSPGETEPYSDLQRNFGSALEHIKTLSFGRHNGLFSRFKRKYVYQLPWYVFIG
APGSGKTTALVNSGLRFPLLDVLGKESVKGVDGTRNCDWWFTEDAVFLDTAGRYTTQDSS
AEADKQEWHGFLGLLRKFRPKQPLNGAIVTLSVADLLVADDKACEQQARQIRSRLADLTE
SLGVNFPVYVLLTKADLLGGFSDYFAGLSKEEREQVWGFTLPETQGGASVDSDILAREML
ALSTRLFDGLPTLMLQEHDITRRAHAYAFAQNFANALPLARQVIEQVFYGSVLTNINFRG
VYFASGTQEGTPFDRVLGALSRRVGVSSSININKNAASGKSYFIKDLINKVVLPEAHLAG
RNRREERKELFWSVAGHLCVAGLLFVIGGLWFQSYGKNKEYVEYVADKNLALSKKMDSLS
SLDPSRALEYLPVLDELLVMADGRNFSAEDPPLTVTLGLYQGEKLSAASDYVYRDALDRT
LLPLVSKRLAFLLESSGEHDLGFSYQALKAYLMLWDTEHYDGEELLAFVSDDFQENLPGG
VSPRIRESLNVHLANLLHESVVEPGPINAQLVERKRQLLGRSAFSQRAYIQAKGQLLGTV
GTGFSFSSAAGPKSAFVFRRESGLPLSAGISELYTNHGYHKLFLPALSDVVPSMASEDSW
VLGAYSTFGEGKPDLLTLAEQERAVKRLYLHEYVVQWEDYLADLRLVETHSMPETIEVAR
ILSSVDSPLIQLLQAAVHEVNLGNTFSDAEVSVVKQAVRRAGVAVSTLERNLDGLATGLD
GSEVLERIVDDRFKGITQLVSGQGGGSSSIDALLRMFNEVYISLSNTDYSIRSGSTSLGQ
SDAITQIRSEAARFPSPVRPVLEGLTLEGKRQAEGGIRSTLSDELNRSVGDFCRVAIRGR
YPFDQHSTRDVTMADFSRMFAPSGMMDKFFNQHLRQMTDTTGRAWILRASTEDYVPIGAF
QQAAKIRDVFFPQGASAPEISFDFKVLEMDAQIKQLTLDFDGQVFHYSHGPQLSRSVTWP
GPRGGNQIRLELDGVEPSRRAFKVAGPWALMRLFQSSDNRSDISPEAFTSTVLVNGYKVV
FEVTASSVNNPFYLAALDRFSCPSRI
NT seq 3321 nt   +upstreamnt  +downstreamnt
atggctaaactgaagccagagggatctccgggcgaaactgagccttatagtgatttgcag
cgcaactttggctctgctctggagcacattaagacactgtcgtttggtcgtcataacggc
cttttttctcgttttaagcgaaagtatgtttatcagttgccgtggtatgtctttattgga
gcgcctgggtccggtaaaacgacggctttggtaaacagcgggctgcgttttccactattg
gacgtactcggtaaagagtcggtgaaaggcgtagacggtacacgtaattgtgactggtgg
tttactgaagacgctgtttttttagataccgcggggcgctatacgacgcaagacagtagc
gccgaggcagataagcaggagtggcacggctttttgggcttgttgcgtaaatttcgtcct
aaacagcctctaaatggtgcgattgttactttatcggttgctgatttattggtggcagat
gataaagcgtgtgaacagcaagcgcgccaaattcgctctcgtttggcagatcttactgag
agtttgggtgttaactttccggtttatgtgttgttaacaaaagcagatctgttgggcggg
ttttcagattacttcgcggggctgtcaaaagaggagcgcgagcaggtatggggctttacg
ctgcccgaaacccaaggtggtgccagcgtcgattctgatatcttggcgcgtgaaatgcta
gccttatctacgcgcctttttgatgggctgcccacattaatgctgcaggagcatgatatt
acgcgccgtgcccacgcctacgcatttgcacaaaacttcgccaatgctttgccgttggct
cgtcaagtcatagagcaggttttctatggcagcgtattgaccaatattaactttcgaggg
gtttatttcgccagcggcacccaagaaggtacgccgtttgatcgggtgctgggggcattg
tcgcgccgtgttggtgtaagctcgagcatcaatatcaataaaaatgctgcatccgggaaa
agctattttattaaggatcttatcaataaggttgttttacctgaggcgcatctcgcggga
aggaatcgccgagaagagcgcaaagagctgttctggagtgttgctggacacttatgtgtg
gcgggcttgttgtttgttatcggtgggttatggtttcaaagttacggcaaaaacaaggag
tatgttgaatatgtagccgataaaaacttggcgttgagtaagaaaatggattcgttgtcg
agtttagacccatcgcgagcgcttgagtatttgccggttttggatgagcttttggttatg
gcggatgggcgaaactttagtgccgaagatccccccttaactgtaaccctgggtttgtac
caaggggaaaaactcagcgcggcatcggactatgtttatcgggatgcactggatcgtaca
ctgctgcctttagtgtcaaaacgtttggcctttttgcttgagtcatccggtgagcacgat
ctgggttttagctatcaagctttaaaagcctatcttatgctgtgggatacggagcattat
gacggagaggagttgctggcgtttgtgagcgatgatttccaggagaatttacctggggga
gtttcaccccgtatccgagagtcgttaaacgtccatttagctaatcttttgcatgagtct
gtcgtagagccggggcctattaacgctcaattggtcgagcgaaagcggcaacttttagga
cgctctgctttttcgcaacgcgcctatattcaggcaaaggggcagctgctgggtacggtt
ggcactgggttttctttttccagtgcggcgggacccaaaagcgcatttgtctttaggcga
gaaagcggtttgcctttgagtgctggtatttcggagctatatactaatcacggttatcat
aagctgtttctgccagcactaagtgatgttgtaccgagtatggcgtcggaagatagttgg
gtgttgggggcttactcgacttttggcgagggtaaaccggacttactgacgcttgccgag
caagaacgtgcggttaagcgtttgtacctgcatgagtacgtcgtacagtgggaagattat
ttggccgatcttagattggttgagactcattcgatgcccgagacgattgaggtggcgagg
attttgtcgtcggttgattcgcctctgatacaactactgcaagccgctgtacacgaggtt
aatttagggaacacgttctctgacgctgaggtgtcggttgtgaagcaggctgtgcgtcgg
gcgggggtcgcggtatctaccttggagcgaaacctagacggtttggcgaccgggctggat
ggcagtgaagtccttgagcgcatcgttgatgatcggtttaaaggcattactcaactagtg
tctggacagggtggtggatcgtcttcgatcgatgcgttgctgcggatgtttaatgaggtt
tatattagcttgtctaatactgactattcgattcgaagtggttctacctctctcgggcaa
tccgatgctattactcaaattcgttctgaagccgctcgttttccgagcccggtaaggcct
gtgctggagggcttgacgctagagggtaagcgtcaggcagagggtggtattagaagtact
ttaagcgatgagttgaatcgctctgtgggcgacttttgccgcgtggcgatacgcggccgc
tacccgtttgatcaacactcgacgcgcgatgtcacaatggcagacttttcacgaatgttt
gctccttcagggatgatggataaattttttaatcagcatcttcggcagatgacggatacc
accggtcgcgcttggatcttacgcgcttcaaccgaagactatgtaccaattggagcgttt
cagcaggcggcaaaaatacgtgacgtgtttttcccgcagggtgccagcgcgccagaaata
tcgtttgactttaaggtgctagaaatggatgcccagatcaaacagttaacgctagatttc
gatggtcaggtttttcattactcgcacggcccacagctctcaaggtcggtgacttggccc
ggccctcgtggaggtaatcagataaggcttgagttggacggggtcgagccttctcgtcgt
gcatttaaagtggccggcccctgggctcttatgaggttgtttcagtcaagcgataaccgt
agcgatatatcaccggaggcgttcacttccacggttttggtgaatggttataaagtggtc
tttgaagtgaccgccagcagcgttaataacccgttttatttggctgcgcttgaccgtttt
tcatgccccagccggatttag

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