Gilvimarinus japonicus: R50076_09920
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Entry
R50076_09920 CDS
T10758
Name
(GenBank) DEAD/DEAH box helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
gjp Gilvimarinus japonicus
Brite
Enzymes [BR:
gjp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
R50076_09920
Ribosome biogenesis [BR:
gjp03009
]
Prokaryotic type
rRNA helicases
R50076_09920
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NCBI-ProteinID:
BFM19943
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Position
1168529..1169809
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AA seq
426 aa
AA seq
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MQAEAIPAVIEGADVAVCAPTGSGKTLAFLLPMLQLLLTRKTGKGAIRALVLTPTRELAR
QIVSEARKLCEQDMINVVALTGGDSKSAQRDLIATADLLVATPGRMSEFVGAQLADLSNL
EFLVVDEADRTLDMGFADEVTRIAKACAEQRQTLLYSATLRAKGLGQLLLAMTNPDTLRR
IDIAQSATKMQQEKILADDWPHKCQLLAALCRQREFRRAVIFANTRERVNEIVRSLDSAE
VRSLALHGEVEAKIRKQVMARFSSGQCNILVATDLAARGLDIDGIDLIINADLPYNVPSF
IHRAGRTARADAGGTVLSLVTAQGWNLMADIERHLGKAAKFVQLEGLVARYRGPKKIKSS
GKAAGKKPVKARAKNAKKDSAEGGKTKKRQRDQKNIGKRRKTAVKATSSSGPKGWVSPSK
KSEKDV
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
gtgcaagccgaggctattcccgctgtgattgagggggccgatgtcgctgtctgtgccccc
actggcagcggtaaaaccttggcatttttgctgcctatgttgcagttgttgcttacgcgt
aaaaccggcaaaggcgctattcgcgcgctggtgcttacccctacgcgagaattagcccgg
caaatcgtctctgaggcgcgcaaactgtgtgagcaagatatgattaatgttgtcgccctt
acgggcggcgatagcaaatccgcgcagcgtgatttaattgctacggccgatctgttggtg
gcaacgcccgggcgtatgtctgagtttgtcggtgctcagcttgccgatctatcaaacctt
gagtttttagtagtcgatgaagccgaccgcactttggatatgggctttgccgacgaggta
acccgcattgccaaagcctgcgctgagcagcgacaaaccctattgtattcggcgacactg
cgggccaaggggttagggcagttgttgttggcgatgaccaaccccgacactctacgccgc
attgatatcgctcagtcagccaccaagatgcagcaagaaaaaattctcgccgacgattgg
cctcataagtgtcaattgctggccgcgctgtgtcgccagcgcgagtttcggcgtgcggtg
atttttgccaacacccgcgagcgggtgaatgaaattgtacgttcactggacagtgccgag
gtgcgctcgttggcgttacacggtgaagtcgaggctaaaattcgcaagcaagtcatggcg
cgttttagcagcggccagtgcaacattctggtggcgactgacttggcggcacgaggcctg
gatatcgatggtatcgatttaatcattaacgccgatctgccttacaatgtcccaagtttt
atccatcgagccggccgcacggcgcgcgctgatgccggtggtaccgtattgtcattagtc
acagcccaaggctggaacctgatggcagatatcgagcggcacctgggtaaagcggcaaag
tttgttcagttagagggcttggtggcgcgttatcgcggcccgaaaaaaattaaaagttcg
ggtaaagcggcgggcaaaaagccggttaaggcacgagctaaaaatgcgaaaaaagacagc
gccgagggcggcaagactaaaaagcgccagcgggaccaaaagaatattgggaagcgtcgc
aaaacggctgtaaaggcgacatcatcgagcggcccgaaaggttgggtgagccctagtaaa
aagagtgaaaaggatgtttga
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