Gilvimarinus japonicus: R50076_09960
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Entry
R50076_09960 CDS
T10758
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
gjp Gilvimarinus japonicus
Pathway
gjp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gjp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
R50076_09960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gjp02000
]
R50076_09960
02044 Secretion system [BR:
gjp02044
]
R50076_09960
Transporters [BR:
gjp02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
R50076_09960
Secretion system [BR:
gjp02044
]
Type I secretion system
Adhesin protein transporter
R50076_09960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
Peptidase_C39
AAA_21
AAA_29
AAA_23
ABC_ATPase
Motif
Other DBs
NCBI-ProteinID:
BFM19947
LinkDB
All DBs
Position
1174103..1176253
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AA seq
716 aa
AA seq
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MSDKADEVSHASLRGGPLLNCLLILSRMHGVNTSGSTLLSGLPLQHEQLPPSLFERAARR
AGLTSQLARRSLSDINQSLLPVILLLEGNEACVLLGIDGEQAEVVFPDLDQTQVNIPLEE
LEQRYSGRVIYARPRMQFSARNADIHQTQKGHWFWEVIKAHRGLYRDVLFAALLVNVFAL
AMPLFVMNVYDRVVPNFAIETLWVLASGVAIVLCADLCLKMVRAWFVDLAASRVDITLSA
TIMSRVLGMRMSERPTSVGSYAAGLQAFESVRSFIGSSTIIAFVDLPFVVLFSIIIGLLT
SWWLVLPIAVGVLLCLLYAAAVQAKMHELSMSSMEASAYRNAVLVESLNGLEALKTLGAE
GKMQNLWEKTSVFLSRTTTKMRLLSGSVTTGAVWVQQLVAVAIIIVGVYLITAGELTQGG
LIAAYMLSSRIMAPVGQSAALMMQYHQAATALESVDRVMNTPVERPEQAEWIARPKLDGR
IEFNNVSFSYPHDERHALRDVSFSIAPGEKVAILGRNGSGKTTIEKIIAGLYAPSAGRVL
IDNIDIGQLDPAQLRHNIGYVSQDINLFLGTLRENITMADPRIDDEQLLKIVELSGLASF
INSHPQGLSMPVGERGELLSGGQRQAVAVARAMVTDPSILLLDEPTGAMDHTSEEELKRK
LAKFSLGKTMLVITHRNSLLAMVDRIIVIDAGKIVADGPKDQVVEALRQGRIGRAN
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataaagctgacgaggtaagccacgcctcgttacgcggtggtccactgctaaat
tgtttactgattctgtcccgtatgcatggcgttaacacgtccggctcgacactgctgtcc
ggcttacccttgcagcacgagcagttacctccctcgttatttgagcgcgcggcgcgtcga
gccggccttaccagtcaattggctcgacgttcgttgagtgatattaatcaatcgctatta
cccgttattttgttgctcgaaggcaatgaagcgtgtgttttattggggattgatggggag
caggccgaagttgtttttcctgatctggaccaaacccaggttaatattccgcttgaagag
ctcgaacagcgctacagcggtcgggtgatatacgcgcgcccgcgtatgcagtttagcgcg
cgtaacgccgacattcaccaaacccaaaaagggcactggttttgggaggtcattaaggca
caccgaggtttatatcgcgatgtgttgttcgcggcgctgttggtgaatgtatttgcgttg
gcaatgccgttgtttgtgatgaatgtgtacgatcgggtggtgccgaactttgctattgag
acactgtgggtgttggcctcgggtgtcgccattgtgttgtgcgccgacctgtgtttaaaa
atggtgcgagcatggtttgtggatttggcggcaagccgggtggatatcacgctgtcagcc
actattatgtctcgtgtgctaggaatgcgcatgagcgagcggccaacctcggtaggttcc
tacgcggccggcttacaagcgtttgaatcggtgcgcagttttattggctcgagcacgatt
atcgcgtttgtcgaccttccttttgtggtgttgttcagcataattattggcctcttaacg
tcctggtggttggtgctgccgattgcggtaggggtgcttttgtgtctgttgtacgccgcg
gcggtacaggcaaaaatgcacgagttgtccatgagcagtatggaggccagcgcctatcgc
aatgctgtgttggtagagagcctcaatggccttgaggcgctaaaaaccttaggggctgaa
ggtaaaatgcaaaacctgtgggagaaaacgtctgtgtttctctcgcgcacgaccaccaag
atgcgcttgctctcgggctcggtaacaaccggcgccgtgtgggtgcagcaattggtggca
gtggccattattatcgtaggcgtgtatttaattaccgcgggcgaacttacccaaggcggc
ctgattgcagcctatatgttgtcgtcacgaattatggcgcccgtgggccaaagcgccgcg
ttaatgatgcagtatcatcaagcggctaccgctttggaaagtgttgatcgagtcatgaac
accccggttgaacggcccgagcaagcggagtggatagcgcggccaaagctggatgggcgc
attgagtttaacaatgtgtcgtttagttatcctcacgatgagcgccatgcgctgcgcgat
gtaagctttagtattgccccaggtgaaaaagtggcgattctcggccgaaacggctcgggt
aaaaccaccatcgagaaaattattgccggcctttacgccccaagcgccgggcgggtactg
attgataatattgatatcggtcagttggacccggcgcaattgcgccacaatattggttat
gtttctcaagacattaatttgtttctcggtacgctgcgcgagaacatcactatggccgac
ccgcgtattgacgatgaacaattgcttaaaattgtcgagttgtcggggttggccagtttt
attaattcgcacccacagggcttatcgatgccagtaggcgagcgcggcgagctgctctcg
ggcggccagcgccaagcggtagcggtcgctcgcgcgatggtaacagacccgtctatcttg
ctcttggacgagccgaccggtgccatggaccacaccagcgaagaagagcttaagcgtaag
ctggctaaattttcgctgggtaaaaccatgttggtgatcactcaccgcaactctttgctg
gccatggtcgatcgtattattgtgatcgacgcgggcaaaatcgtcgccgatgggccgaaa
gatcaagtggtcgaagctctgcgtcagggtagaatcgggagggctaattag
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