Gilvimarinus japonicus: R50076_11780
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Entry
R50076_11780 CDS
T10758
Symbol
kdsB_1
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
gjp Gilvimarinus japonicus
Pathway
gjp00541
Biosynthesis of various nucleotide sugars
gjp01100
Metabolic pathways
gjp01250
Biosynthesis of nucleotide sugars
Module
gjp_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
gjp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
R50076_11780 (kdsB_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
gjp01005
]
R50076_11780 (kdsB_1)
Enzymes [BR:
gjp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
R50076_11780 (kdsB_1)
Lipopolysaccharide biosynthesis proteins [BR:
gjp01005
]
Lipid A
R50076_11780 (kdsB_1)
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GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
Motif
Other DBs
NCBI-ProteinID:
BFM20129
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Position
complement(1426999..1427751)
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AA seq
250 aa
AA seq
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MTKNVGTVLGVIPARYNSSRFEGKPLAKIAGVPMILRTYNQVKQSSLLNDAIVATDDPRI
LEFCHTENIPCCMTSSGCLTGTDRVYEVSEQLDYDLYINIQGDEPVIDPKSIDQILTLFS
VHGDNYAAYNLYKYITDETEINSDTIIKVITNELDEVMYMSRLPVPFSKAGMVPNFKQQI
PIYGYTKNALKTFAARAKTINEQFEDVELLRFIDMGLQIKMEETNVSSIAVDTPSDILKV
ERFLTAQKLN
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgactaaaaatgttggaacagttctgggggtaatacctgccagatacaattcatcaaga
tttgaggggaaaccactggccaagattgccggcgtccctatgatcctgagaacatataat
caagtcaaacaatctagtctgttaaatgatgctattgttgctacagatgaccctcgaatt
ttggagttttgtcacaccgaaaatattccatgctgcatgacaagctccgggtgccttacc
ggaaccgatagagtttatgaggtcagcgagcaactagattacgacttatacattaatata
caaggcgacgaacctgtaattgacccaaaaagtatcgaccaaatactcactttattttca
gtgcacggggataattatgcagcgtacaatctatataaatacattacagacgagacagag
attaacagcgatacaattattaaagtgatcaccaatgagcttgatgaagtcatgtacatg
tctagacttccagtaccgttctccaaagccggcatggtgccaaactttaagcagcaaatt
ccgatatatggttacactaagaatgcactgaaaacttttgcagcacgcgccaagacaatt
aatgagcagtttgaggatgttgaattgctaagatttattgatatggggttgcaaatcaag
atggaagagaccaatgtttcttctatcgctgttgatactccttcagacatattaaaagtc
gagagatttttaacggctcaaaaactgaattaa
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