Gilvimarinus japonicus: R50076_12440
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Entry
R50076_12440 CDS
T10758
Symbol
fadD1
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
gjp Gilvimarinus japonicus
Pathway
gjp00061
Fatty acid biosynthesis
gjp00071
Fatty acid degradation
gjp01100
Metabolic pathways
gjp01212
Fatty acid metabolism
gjp02024
Quorum sensing
gjp04146
Peroxisome
Module
gjp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
gjp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
R50076_12440 (fadD1)
00071 Fatty acid degradation
R50076_12440 (fadD1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
R50076_12440 (fadD1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
R50076_12440 (fadD1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
gjp01004
]
R50076_12440 (fadD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gjp04147
]
R50076_12440 (fadD1)
Enzymes [BR:
gjp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
R50076_12440 (fadD1)
Lipid biosynthesis proteins [BR:
gjp01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
R50076_12440 (fadD1)
Exosome [BR:
gjp04147
]
Exosomal proteins
Exosomal proteins of breast milk
R50076_12440 (fadD1)
Exosomal proteins of breast cancer cells
R50076_12440 (fadD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
BFM20195
LinkDB
All DBs
Position
1507598..1509199
Genome browser
AA seq
533 aa
AA seq
DB search
MTLDCNRTVVEVFTETCSQFADSPAFTCLGHTLTFREVEHLSGRFAAFLQQKTNLKPGDR
IAVQLPNVLQYPVVVFGALRAGMIVVNTNPLYTSSELKHQLTDSGARALVVLANVASAAA
DVVAETDVEEVIVTELADLHPPLKSLLINSVVKYIKKLVPAFSFASSRSFKSVMKATKAE
VQPHHATPEDVAILQYTGGTTGVAKGAMLTHHNLVANMLQVNQQMGDVFRKNQDIFIAPL
PLYHIYAYTIHCMCAFSLGNENLLIPNPRDIPGFAKALKGVPFTCFVGLNTLFNALCRNE
DFRALDFSHMRLSSSGGMALTHHAAKQWEEVTGTPVCEGYGLTETSPVVCINPRYGIRLG
TVGLPVPQTQVKVIDEEGSELPVGEAGELCVKGPQVMKGYWQRSDATAEAIDAQGWFKTG
DIATIDADGYVKIVDRKKDMINVSGFKVFPNEVEDALAEHPDIIEAAVVGMEDEESGELV
KAFVVSTNSALTEKQVREFARQSLTAYKVPSSVEFRDELPKTNVGKVLRRELK
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgacattagattgtaatcgcaccgtggtggaggtgttcaccgaaacctgtagtcagttt
gccgacagtccggcatttacttgtctgggtcatacgttgacctttcgcgaggtcgagcat
ttatccggtcgctttgcggccttcttgcaacaaaaaaccaatttaaagcccggtgatcgc
atcgccgtccagttgcctaatgtgctgcagtaccctgtggttgtgtttggtgcgttgcgc
gccggtatgattgtggttaacaccaacccgttgtatacctcgtcggagttaaaacaccaa
ctaacggattcgggcgctcgggcactggtggtgctggcaaacgtggccagtgcggcggcg
gatgtggtggccgagaccgatgtagaagaggtgattgttaccgagcttgccgatttacac
ccaccgcttaaatcgttgttgattaactcggtcgttaagtacattaaaaagctggtgccg
gcgtttagttttgcctcgagccgctcctttaagtcggtgatgaaggcaactaaggccgag
gttcagccccaccatgccaccccagaagacgtcgctattttgcagtacaccggcggcacg
accggggtcgcgaaaggcgcgatgctgactcaccacaacctcgtggctaatatgctgcag
gtcaatcagcagatgggcgatgtgtttcgtaaaaaccaagacatttttattgcaccatta
ccgctttatcatatttacgcctataccattcactgcatgtgcgccttttcgctgggcaat
gagaatcttctgattcctaatccgcgggatattccgggttttgctaaagcgctaaagggg
gtgccttttacgtgttttgtggggcttaacaccctgtttaatgctctgtgccgcaacgag
gattttcgcgcattggattttagccatatgcgtttgtcgtcgtccggtggtatggcgtta
acccatcacgctgccaaacagtgggaggaggtcaccggcacgcctgtgtgtgagggctac
ggtcttaccgaaacctcgccggtggtttgtattaacccgcgttacggtattcgtttgggg
acggtggggctgcccgtgccgcaaactcaggttaaagtgatcgacgaagagggcagcgag
ctacccgtcggtgaggccggtgagctgtgtgtcaaagggccgcaggtgatgaaagggtac
tggcagcgctccgatgcgaccgccgaagctattgatgcacagggctggtttaaaaccggc
gatatcgcgactattgacgccgacggttacgtcaaaattgtcgatcgcaaaaaagatatg
attaacgtctcgggctttaaagtctttcctaacgaggttgaagacgcgttggctgagcat
ccagatattatcgaagcggcagttgtcggcatggaagacgaagaaagcggagaactggtg
aaagcttttgtggtcagcactaattcggcgttaactgaaaaacaggtgcgggagtttgcg
cggcaatcgctaaccgcgtataaggttccgagctcggttgagtttcgtgatgagctgccc
aagaccaatgtgggtaaagtgctgcgtcgcgagctgaaatag
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