Gilvimarinus japonicus: R50076_14480
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Entry
R50076_14480 CDS
T10758
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
gjp Gilvimarinus japonicus
Brite
KEGG Orthology (KO) [BR:
gjp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gjp03016
]
R50076_14480 (truA)
Enzymes [BR:
gjp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
R50076_14480 (truA)
Transfer RNA biogenesis [BR:
gjp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
R50076_14480 (truA)
Prokaryotic type
R50076_14480 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
BFM20399
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All DBs
Position
1748298..1749197
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AA seq
299 aa
AA seq
DB search
MSERYYTRNCEISPGTPWPEGMQRVALGVEYNGYDFRGFQVQPGGVPTVQDYLQKALSKI
ACEPVTLVCAGRTDAGVHATGQVVHFDTQANRPDKAWVLGARPHLPNGVGVRWARTVPND
FHARFSAHSRAYRYLLSDANARPALLHDQVTWVRHKLDVDAMAIAAQYLVGTHDFTSYRA
AQCQAHSPVRTVEHLHLSRRGDLIILEIKANAFLHHMVRNIVGVLLEVGRGARPVTWPAD
VLAARQRSAAAATARPNGLYLVAVDYENRFALGRGNPGPLFLADPVGALAGRAGGSKND
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacgctattatactcgcaactgtgagatctcccccggtaccccttggcccgag
ggaatgcagcgcgttgcgttgggtgttgagtacaatggttacgattttcgtgggtttcag
gtacagcctggtggtgtgcccacagtgcaagattatttgcaaaaagcgttatctaaaatc
gcctgtgaaccggtaacattagtctgtgccggtagaacagatgccggcgtccacgccacc
gggcaggtggtgcattttgatactcaggcaaaccggccggacaaagcctgggtgttgggt
gcccggccccatttgcctaatggcgttggtgtgcgctgggcacgtaccgtgcccaatgat
tttcatgcccgctttagtgctcactcgcgggcttatcgctacttgttgagtgacgccaat
gcacggccggcgctattgcacgatcaggttacctgggtgcgccacaagctggatgtggac
gctatggctattgctgcacagtacttggtgggcacccacgattttacctcttaccgggct
gcccagtgtcaggcgcacagcccggtacgcacggtcgagcatttgcacctgtctcgccgg
ggtgacttaattatcctagaaataaaagccaatgcgtttttacatcatatggtgcgcaat
atcgtcggtgtgctgcttgaggtggggcggggcgctcgccccgttacctggcccgccgat
gtgcttgcggcgcgacagcgctcagcggcggcagcaaccgcgcgccccaatggtttgtac
ctggtagcggtggattacgaaaatcgttttgcactggggcgaggtaatccgggcccattg
tttcttgccgatcctgtgggcgcgcttgcggggcgcgcgggtggcagcaaaaatgattaa
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