Gilvimarinus japonicus: R50076_17380
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Entry
R50076_17380 CDS
T10758
Symbol
gabD
Name
(GenBank) NADP-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
gjp Gilvimarinus japonicus
Pathway
gjp00250
Alanine, aspartate and glutamate metabolism
gjp00310
Lysine degradation
gjp00350
Tyrosine metabolism
gjp00650
Butanoate metabolism
gjp00760
Nicotinate and nicotinamide metabolism
gjp01100
Metabolic pathways
gjp01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
gjp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
R50076_17380 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
R50076_17380 (gabD)
00310 Lysine degradation
R50076_17380 (gabD)
00350 Tyrosine metabolism
R50076_17380 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
R50076_17380 (gabD)
Enzymes [BR:
gjp01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
R50076_17380 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
R50076_17380 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
R50076_17380 (gabD)
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Motif
Pfam:
Aldedh
DUF3209
Motif
Other DBs
NCBI-ProteinID:
BFM20689
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Position
2040390..2041874
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AA seq
494 aa
AA seq
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MTSNANTPAFKLECPELWREQCFFAGTWSAGSSGESIEVVNPATDEILARVPKLSAKDLD
HALTAAHQGFIFWRGLSAPERAAKLRRWFELMQEHKEDLARIMTAEQGKPIAESRGEIDY
AASYIEWFAEEAKRGYGEMIPASKPGQHLLVRPEPIGVSVAITPWNFPAAMITRKAAAAL
AAGCSMVVKPASMTPLSALALAYLAQQAGIEESVFSVVTGDSETVGKAFTESTLVKKLSF
TGSTSVGRKLMAQCAPNLQKLSLELGGNAPFVVFDDADVALAVKGAIGSKFRNSGQTCVC
PNRFLVQAGIHDKFVAALKHAMSELKVGDGFDESVKQTSLINAGAVDKVKRHYDDALAKG
AECVLGDVPGSLPHNRVAPILLVGVTPKMQLWQEETFGPVAPIMKFTTEQEGVELANSTP
FGLAAYFYTQDVDRSWRVGEALESGMVGVNEGGISNAMAPFGGVDQSGFGREGGRQGIQE
YQQLKYLCYGPARS
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgactagtaacgcaaatactccagcctttaaattagagtgccccgagttgtggcgcgaa
cagtgcttttttgccggaacctggtctgcaggtagctctggtgaatccattgaggtggtc
aacccggccaccgatgaaatcttagctcgggttcctaagttgtcagcaaaggacctcgat
catgcattaacggccgcccaccaaggttttatcttctggcgcggattaagcgcgccagag
cgagcggctaaattgcgccgctggtttgagctgatgcaagagcacaaagaggacttagcc
cgcatcatgactgccgagcagggcaagcccatcgcagagtcgcgtggcgaaatcgattat
gcggcgtcttacattgaatggtttgccgaagaggcaaagcgtggctacggcgagatgatt
cccgcatcaaagccggggcagcatcttttggttaggcctgagccgatcggggtcagcgtc
gcgatcactccgtggaactttcccgctgcgatgattacccgtaaagcggcggcagcgcta
gcggcgggttgctcaatggtggtcaaacccgcctctatgacgcccctaagtgcgctggcg
ctggcttatttggcccagcaagcaggtattgaagagtcggtgtttagcgttgtgactggc
gactcagagacggtcggtaaagcctttaccgaatcgacactggtgaaaaaattaagtttt
accggttcgacctccgtggggcgcaaattaatggcgcagtgcgcgcccaatttacaaaag
ctctcattagagctgggcggcaatgcgccttttgtggtgtttgatgatgcagatgttgcc
cttgcggtgaagggcgccattggctctaaattcagaaactcgggccaaacctgtgtttgt
cctaatcgctttttggtgcaggcgggtattcacgataagtttgtcgcagcgctaaaacac
gcaatgagtgagttaaaggtcggcgatggttttgacgagagcgttaaacaaacctccctt
attaatgccggtgccgtcgataaagtaaagcgccactacgatgatgctctggcaaaaggg
gccgagtgtgtgttgggcgatgtgccgggtagcttgccgcataatcgcgtcgcgccgatt
ttgctggtgggggtaacccctaaaatgcagttgtggcaagaagaaacctttgggccagtg
gcgccaattatgaaatttaccaccgagcaagaaggcgttgagctggccaactctactcct
ttcggtttggcggcgtatttttatacccaagatgtagatcgctcttggcgcgtgggcgag
gcactggagtctggcatggtgggggttaacgaaggcggtatctctaacgctatggcaccc
tttggcggtgtcgatcaatctggctttggccgtgagggagggcgccaggggattcaagaa
tatcagcaacttaaatacctttgctatggcccggcaaggtcataa
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