Gilvimarinus japonicus: R50076_18120
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Entry
R50076_18120 CDS
T10758
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
gjp Gilvimarinus japonicus
Brite
KEGG Orthology (KO) [BR:
gjp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gjp01011
]
R50076_18120
Enzymes [BR:
gjp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
R50076_18120
Peptidoglycan biosynthesis and degradation proteins [BR:
gjp01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
R50076_18120
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
LysM_RLK
LysM2_CERK1_LYK3_4_5
NMB0315_dom_I
LTD
Motif
Other DBs
NCBI-ProteinID:
BFM20763
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Position
2136443..2138032
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AA seq
529 aa
AA seq
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MTAVSRIALLCLFSVILNGCSSILAENDDFQEPIGADDEAPEETQPVAVSAPPIAAPKPA
PAELTLLDRMTAGFVLSELDHKRINQYESWYASHPEYIDRVFERGQRYLYYIVQRLEEEG
LPLEIALLPVVESAFDPFAYSHATAAGMWQFMSGTAGDYGLKENWWYDGRRDVVASTNAA
ISYLKRMHSLFDGDWLLALAAYNTGQGRLARAIRANKRAGKPTDFWSLKLPRETQAYVPQ
LLALSQVVANPKHYKITLPEISNAPYFVAIDIGSQLDLAQAAELADITMEELYLLNPGFN
RWATDPAGPHRLLIPSTHAESFTAALAGVEPSQRISWERYKIRSGDSLIRIANNHNTSVE
ALKSANQLRSSRIRAGDVLLIPTASAGADYYELSAIQRQLGTQSRSKSTSGEKISYTVRK
GDSFWRIANNHQVSVSSLARWNGMSPRDTIKPGQKLVVWSKNVKDQTGDDDAVVRKLSYK
VRNGDSLARIASRFNVSIKDITRWNKVSTKKYIHPGQQLTLFVDVTKGH
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgtatctcgtattgccctactgtgcttattttcagtgattttaaacggatgc
agcagcatcctcgccgaaaacgacgactttcaagaacctattggcgcagacgatgaggcg
ccggaagaaacccagccggtagccgttagcgcaccccctattgccgctcccaagcccgcc
cctgccgagctaacgctgctcgatcgcatgacggccggctttgttttgtctgagctagat
cacaaacgtatcaatcaatatgagagctggtacgcaagccacccagaatacatagaccgc
gtatttgagcgcggccaacgctacctttactacattgttcaacgcctagaagaggaaggc
ctgccattagaaatagccctgctgcctgtggtggaaagcgccttcgacccatttgcctac
tctcacgcgaccgctgcaggtatgtggcagtttatgtctggcaccgccggcgattacggc
ttaaaagaaaactggtggtacgacggtcgacgcgatgtagtggcctcaaccaacgctgcc
attagctacttaaagcgaatgcactcgctgttcgacggtgactggctgttggccctggcc
gcttacaacaccggacaaggccgtttggcgcgcgccatcagggctaataaacgcgcgggt
aaacctactgacttttggtcgctcaagctcccgcgcgaaacccaggcgtacgtcccacaa
ctgctggcgctctctcaagtagtggcaaaccctaaacactacaaaattaccttacctgag
atctccaacgcaccctattttgtcgctatcgatatcggctcgcagctcgatttagcccaa
gccgctgagctggccgacatcacaatggaggagctctacctattaaaccccggctttaac
cgctgggcgacggacccggccggcccgcaccggctgctgatacccagcacacacgccgaa
agctttactgcggcattggccggagtggagccatcccaacgcatcagttgggagcggtac
aaaattcgttcgggtgacagtcttatccgcattgccaacaaccacaacaccagtgtagag
gcccttaaaagcgctaatcagttgcgctcgtcgcgcattcgcgccggcgatgtattgctg
attccaacggccagcgctggtgccgattactacgagctgagcgcgatccagcgccaactc
ggcacccaaagccgatctaagagcactagcggcgagaaaatcagctacaccgtgcgcaag
ggcgatagcttttggcgaattgccaataaccatcaagtcagtgtcagctcgttggcgcgc
tggaacggcatgtcgccgcgcgacaccattaaacctgggcaaaagctggtggtgtggagc
aaaaatgttaaggaccaaaccggcgatgacgatgctgtggtgcgcaagctatcctacaaa
gtaagaaacggcgattcgttggcgcggattgccagtcgctttaacgtcagcattaaagat
attacccgctggaacaaagtatcgactaaaaaatacattcaccccggccagcaacttacc
ctatttgttgacgttacaaagggtcattag
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