Gilvimarinus japonicus: R50076_18280
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Entry
R50076_18280 CDS
T10758
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
gjp Gilvimarinus japonicus
Pathway
gjp00071
Fatty acid degradation
gjp00280
Valine, leucine and isoleucine degradation
gjp00310
Lysine degradation
gjp00362
Benzoate degradation
gjp00380
Tryptophan metabolism
gjp00410
beta-Alanine metabolism
gjp00640
Propanoate metabolism
gjp00650
Butanoate metabolism
gjp00907
Pinene, camphor and geraniol degradation
gjp00930
Caprolactam degradation
gjp01100
Metabolic pathways
gjp01110
Biosynthesis of secondary metabolites
gjp01120
Microbial metabolism in diverse environments
gjp01200
Carbon metabolism
gjp01212
Fatty acid metabolism
Module
gjp_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
gjp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
R50076_18280 (fadB)
00650 Butanoate metabolism
R50076_18280 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
R50076_18280 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
R50076_18280 (fadB)
00310 Lysine degradation
R50076_18280 (fadB)
00380 Tryptophan metabolism
R50076_18280 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
R50076_18280 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
R50076_18280 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
R50076_18280 (fadB)
00930 Caprolactam degradation
R50076_18280 (fadB)
Enzymes [BR:
gjp01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
R50076_18280 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
R50076_18280 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
R50076_18280 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
R50076_18280 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
BFM20779
LinkDB
All DBs
Position
complement(2157376..2159547)
Genome browser
AA seq
723 aa
AA seq
DB search
MYQGDIFTLTRKAGIAELEINTPDSPVNVFSRKAIAELSQVLDVLEHAELSGLMIVSGKD
SFLAGADIKEFTDVFSSGGEAIAAHLTPNIQNFQRLQSLPFATVAVINKLALGGGLEMAL
ACDYRVADTGARIGLPETRLGIIPGWGGTVRLLRIAGLDTALEWIATAKEASAADALKAH
VLDAVVAQDELRGCAAELLRRCAQGEMDYELRRQQKNQPLALNPIESGLAFESAKAFIAQ
KAGRHYPAPLAALEAIREAATKSALEAAESELAYFIQVAQTDTAKALSGLFIADQALSKK
ARQWQAKASVKTAKLAVVGAGIMGGGIACQSALKGLPVALKDINQKGIDLGLQEAASVLG
RRVEKGKMSVAALAEALTRIQPTLNDQPLATADVVVEAVVENIAVKKTVLADVEAQLPAT
AVLSSNTSTISITELATALTRPEQFCGLHFFNPVHAMPLVEVIRGAKTSDDTVARAVECA
GALGKKAVVVNDCAGFLVNRVLFAYFAGFAALLDDGVDFTHIDAAMVRWGWPMGPAHLLD
VVGLDTAEHAEATMANAFPERMGRTNPSPTTILYQAGLLGQKGGKGFYCYEKDKRGRPQK
TPNPDAVQMLNIQSTAKPDDETIVLRMMAPLVNELCRTLQEGIVGSVAEADMAMIYGLGF
PAHRGGVLRWVDSIGVRQFCEQLNTLRQYGPLYQTEPMMSELAEQGASFYGSAATSATLN
PSH
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgtatcaaggtgatatttttacactaacgcgcaaggctggtattgctgagctggaaatc
aatacgccagactctcccgttaatgtttttagccgcaaagcgatagccgagcttagccag
gtgctagacgtactggagcacgccgagttgtcgggactgatgattgtcagcggtaaagat
tcgtttttggcgggagccgatatcaaggaatttaccgatgtgttttcgtcgggtggcgaa
gcaatcgccgcacaccttacgcccaacatacaaaactttcagcgcctgcagtcgcttcca
tttgccactgtggcggtcatcaataagctcgcccttggtggtggccttgagatggcgttg
gcgtgtgactaccgagtcgcggatacgggcgctcgtattggtttgcccgaaactcgtctg
ggtattattcccggttggggcggtaccgtacgtctacttcgcattgccggtttagatact
gcgcttgaatggattgccaccgcgaaagaggccagcgccgctgatgcactaaaagcccat
gtactcgacgccgtagtggcgcaagacgagctgcgtggttgcgcagctgaattgttgcgc
cgctgcgcacagggcgagatggattacgaattgcgtcgccaacaaaaaaatcagccattg
gcactaaaccctattgagtcgggtcttgcctttgaatcggctaaagcctttatcgcgcaa
aaagccggcaggcattatcccgcccccttggctgcgctggaggcgattcgagaggcggcg
acaaaatccgcgctcgaggcggcagaatcggagctggcgtattttatacaggtggctcaa
acggataccgcaaaagccttaagcggtttgtttatcgccgatcaagcgctctctaaaaaa
gcgcgtcagtggcaggccaaggcgtccgttaaaaccgctaagctcgcggtggtaggtgcc
ggtattatgggtgggggtatcgcctgccagtcggcactaaaaggcttgccggtcgccctt
aaagatatcaaccagaaaggcatcgatttaggcttgcaagaagctgccagcgttctgggg
cgtcgagttgaaaaaggtaaaatgtcggtggcagcgctggcagaggcgctaacgcgtatt
caaccaacgcttaacgaccagccgctggctacggcggacgtggtggttgaagcggtagtg
gaaaatattgcggttaaaaaaaccgtgctggctgacgtggaagcgcagctgccagcgacg
gcagtgttgagttctaatacgtcgactatttctattacggaattggcaacggcattaaca
cggccagagcagttttgcggtctgcatttttttaacccagtgcacgccatgccgttggta
gaagtgattcgcggcgcaaaaacctcggacgataccgttgcgcgcgcggttgagtgtgcc
ggtgcactgggcaaaaaagcggtcgtggttaatgattgcgctggcttcttagtaaaccgg
gttctgtttgcctattttgcgggctttgccgctctacttgatgacggtgtggactttacc
catatcgatgctgccatggtgcgttggggttggccaatggggccggcacacttgcttgat
gtggtggggctggataccgccgaacacgctgaggcgactatggctaacgcgtttcccgag
cgtatgggcaggactaacccctcgccaaccactattttgtatcaggcaggcttgttgggg
caaaaaggcggcaaagggttttattgctatgaaaaagacaagcgcggccgtccgcaaaaa
acacccaacccggatgccgtgcaaatgctcaatatacaatcgacggctaagcccgatgac
gaaaccattgtcttgcgtatgatggcgccgctggtaaacgagctttgccgcaccttgcaa
gagggtattgtcgggtcggtagccgaagccgatatggcgatgatttacggtctgggcttc
ccggcccatcgcggtggtgtattgcgttgggtagacagtattggggtgcgtcagttttgc
gaacaactcaacacgttacgtcagtatgggcctttgtatcaaaccgagcccatgatgtca
gagctggccgagcagggcgcaagtttttatggctcagccgccactagtgccacattaaac
ccaagccactaa
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