Gilvimarinus japonicus: R50076_20600
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Entry
R50076_20600 CDS
T10758
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
gjp Gilvimarinus japonicus
Pathway
gjp00010
Glycolysis / Gluconeogenesis
gjp00020
Citrate cycle (TCA cycle)
gjp00260
Glycine, serine and threonine metabolism
gjp00280
Valine, leucine and isoleucine degradation
gjp00310
Lysine degradation
gjp00380
Tryptophan metabolism
gjp00620
Pyruvate metabolism
gjp00630
Glyoxylate and dicarboxylate metabolism
gjp00640
Propanoate metabolism
gjp00670
One carbon pool by folate
gjp00785
Lipoic acid metabolism
gjp01100
Metabolic pathways
gjp01110
Biosynthesis of secondary metabolites
gjp01120
Microbial metabolism in diverse environments
gjp01200
Carbon metabolism
gjp01210
2-Oxocarboxylic acid metabolism
gjp01240
Biosynthesis of cofactors
Module
gjp_M00009
Citrate cycle (TCA cycle, Krebs cycle)
gjp_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
gjp_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
gjp_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
gjp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
R50076_20600 (lpdA)
00020 Citrate cycle (TCA cycle)
R50076_20600 (lpdA)
00620 Pyruvate metabolism
R50076_20600 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
R50076_20600 (lpdA)
00640 Propanoate metabolism
R50076_20600 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
R50076_20600 (lpdA)
00280 Valine, leucine and isoleucine degradation
R50076_20600 (lpdA)
00310 Lysine degradation
R50076_20600 (lpdA)
00380 Tryptophan metabolism
R50076_20600 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
R50076_20600 (lpdA)
00670 One carbon pool by folate
R50076_20600 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gjp04147
]
R50076_20600 (lpdA)
Enzymes [BR:
gjp01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
R50076_20600 (lpdA)
Exosome [BR:
gjp04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
R50076_20600 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
GIDA
FAD_binding_2
FAD_binding_3
HI0933_like
FAD_oxidored
Pyr_redox_3
AlaDh_PNT_C
DAO
NAD_binding_8
Lys_Orn_oxgnase
3HCDH_N
Thi4
Lycopene_cycl
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
BFM21011
LinkDB
All DBs
Position
complement(2430659..2432113)
Genome browser
AA seq
484 aa
AA seq
DB search
MSDKYDVIVIGSGPAGYVAAIRAAQLGLKTACIEKWKDGKGKGVNGGTCLNVGCIPSKAL
LDSSEKYHEAEVSFSKHGISTGKLAIDVPAMIERKNKVVEQMSGGIGGLFQANKVTSLFG
TGKLLAGKKVEYTNNDGKTETLEAENVILASGSVPVNIGVAPVDNDVIVDSTGALEFTEV
PKRLGVIGAGVIGLELGSVWKRLGSEVVLLEAMDNFLAIMDQQIAKESFKIFGKQGLDIR
LSCRVTGSEVKGKGKKKEVTVTFTDKDGNEQQETFDKLIVCVGRKPFTEGLLSEDSGVNL
DERGFIYVNDLCSTDAPGVWAVGDVVRGPMLAHKGSEEGVMVAERIAGQKPLVNYDIIPN
VIYTHPEVASVGKTEEQLKAEGEPYEVGTFPFLAIGRAVAADQPEGMVKMIAHAETDRIL
GCHIVGPSASDLIQEVAIAMEFGASAEDIGMTVFGHPTFSEAVKEAALAVAGHAIHMPNR
KRKK
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaaatacgatgtgattgtaattggttctggtccggccggttatgtggctgcc
attcgcgctgcacagttgggtttaaaaaccgcctgtattgaaaagtggaaggacgggaaa
ggtaaaggtgtaaatggtggtacttgtctgaacgttggctgtatcccgtcaaaagctttg
ctggatagctcagagaaataccacgaagcggaagtttcttttagcaagcacggtatctct
accggtaagttggccatcgacgtgcccgccatgatcgagcgtaaaaacaaagtcgtagag
cagatgtcaggcggtattggtggtttgtttcaggcaaacaaagttactagcttgtttggt
accggtaagttgcttgccggcaaaaaagtcgaatacaccaataacgatggcaaaacagaa
accctagaggccgaaaacgttattttggcctcgggctcggtgccggtcaatatcggtgtg
gctccagtggataacgatgtgatcgttgactctacaggtgcattggaatttaccgaagtg
cctaagcgtttgggtgttatcggtgccggtgtcatcgggcttgagctgggtagtgtctgg
aaacgtttggggtctgaggttgtgttgttggaagcgatggataacttcctcgcgataatg
gaccagcagattgccaaggaatcattcaagatttttggcaagcaaggtttggacattcgt
cttagctgtcgtgtgaccggctcggaagttaaaggcaaaggtaagaaaaaagaagttacg
gtgacctttaccgataaagacggtaatgagcagcaagaaacctttgataagctgattgtt
tgtgtaggtcgcaagcccttcaccgaaggtctattgtctgaagacagtggcgtaaacttg
gatgagcgtggctttatttacgtcaacgatttatgttctaccgacgctcccggcgtctgg
gctgtcggggatgttgtgcgcggccccatgttggcgcacaaaggttctgaagagggtgtt
atggttgccgagcgtattgccggccaaaaacctttggtgaactacgacatcatccccaat
gtgatctacactcacccagaggttgcatccgtcggtaaaaccgaagagcagctaaaagcg
gaaggcgagccctacgaggtaggtaccttcccgttcttggctattggtcgcgcggttgcc
gctgatcagccagagggtatggttaaaatgattgcacacgctgagaccgatcgtattttg
ggttgccacatcgtgggcccaagcgcatcggatctaatccaagaagttgcaatcgcaatg
gaatttggcgccagtgctgaagatatcggaatgactgtgtttggtcacccgaccttctct
gaggccgtcaaagaagcagcattggcagtggcgggtcacgccatccacatgccaaatcgc
aagcgcaaaaaataa
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