KEGG   Gilvimarinus japonicus: R50076_20600
Entry
R50076_20600      CDS       T10758                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
gjp  Gilvimarinus japonicus
Pathway
gjp00010  Glycolysis / Gluconeogenesis
gjp00020  Citrate cycle (TCA cycle)
gjp00260  Glycine, serine and threonine metabolism
gjp00280  Valine, leucine and isoleucine degradation
gjp00310  Lysine degradation
gjp00380  Tryptophan metabolism
gjp00620  Pyruvate metabolism
gjp00630  Glyoxylate and dicarboxylate metabolism
gjp00640  Propanoate metabolism
gjp00670  One carbon pool by folate
gjp00785  Lipoic acid metabolism
gjp01100  Metabolic pathways
gjp01110  Biosynthesis of secondary metabolites
gjp01120  Microbial metabolism in diverse environments
gjp01200  Carbon metabolism
gjp01210  2-Oxocarboxylic acid metabolism
gjp01240  Biosynthesis of cofactors
Module
gjp_M00009  Citrate cycle (TCA cycle, Krebs cycle)
gjp_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
gjp_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
gjp_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:gjp00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    R50076_20600 (lpdA)
   00020 Citrate cycle (TCA cycle)
    R50076_20600 (lpdA)
   00620 Pyruvate metabolism
    R50076_20600 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    R50076_20600 (lpdA)
   00640 Propanoate metabolism
    R50076_20600 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    R50076_20600 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    R50076_20600 (lpdA)
   00310 Lysine degradation
    R50076_20600 (lpdA)
   00380 Tryptophan metabolism
    R50076_20600 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    R50076_20600 (lpdA)
   00670 One carbon pool by folate
    R50076_20600 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gjp04147]
    R50076_20600 (lpdA)
Enzymes [BR:gjp01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     R50076_20600 (lpdA)
Exosome [BR:gjp04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   R50076_20600 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox GIDA FAD_binding_2 FAD_binding_3 HI0933_like FAD_oxidored Pyr_redox_3 AlaDh_PNT_C DAO NAD_binding_8 Lys_Orn_oxgnase 3HCDH_N Thi4 Lycopene_cycl 2-Hacid_dh_C
Other DBs
NCBI-ProteinID: BFM21011
LinkDB
Position
complement(2430659..2432113)
AA seq 484 aa
MSDKYDVIVIGSGPAGYVAAIRAAQLGLKTACIEKWKDGKGKGVNGGTCLNVGCIPSKAL
LDSSEKYHEAEVSFSKHGISTGKLAIDVPAMIERKNKVVEQMSGGIGGLFQANKVTSLFG
TGKLLAGKKVEYTNNDGKTETLEAENVILASGSVPVNIGVAPVDNDVIVDSTGALEFTEV
PKRLGVIGAGVIGLELGSVWKRLGSEVVLLEAMDNFLAIMDQQIAKESFKIFGKQGLDIR
LSCRVTGSEVKGKGKKKEVTVTFTDKDGNEQQETFDKLIVCVGRKPFTEGLLSEDSGVNL
DERGFIYVNDLCSTDAPGVWAVGDVVRGPMLAHKGSEEGVMVAERIAGQKPLVNYDIIPN
VIYTHPEVASVGKTEEQLKAEGEPYEVGTFPFLAIGRAVAADQPEGMVKMIAHAETDRIL
GCHIVGPSASDLIQEVAIAMEFGASAEDIGMTVFGHPTFSEAVKEAALAVAGHAIHMPNR
KRKK
NT seq 1455 nt   +upstreamnt  +downstreamnt
atgtctgacaaatacgatgtgattgtaattggttctggtccggccggttatgtggctgcc
attcgcgctgcacagttgggtttaaaaaccgcctgtattgaaaagtggaaggacgggaaa
ggtaaaggtgtaaatggtggtacttgtctgaacgttggctgtatcccgtcaaaagctttg
ctggatagctcagagaaataccacgaagcggaagtttcttttagcaagcacggtatctct
accggtaagttggccatcgacgtgcccgccatgatcgagcgtaaaaacaaagtcgtagag
cagatgtcaggcggtattggtggtttgtttcaggcaaacaaagttactagcttgtttggt
accggtaagttgcttgccggcaaaaaagtcgaatacaccaataacgatggcaaaacagaa
accctagaggccgaaaacgttattttggcctcgggctcggtgccggtcaatatcggtgtg
gctccagtggataacgatgtgatcgttgactctacaggtgcattggaatttaccgaagtg
cctaagcgtttgggtgttatcggtgccggtgtcatcgggcttgagctgggtagtgtctgg
aaacgtttggggtctgaggttgtgttgttggaagcgatggataacttcctcgcgataatg
gaccagcagattgccaaggaatcattcaagatttttggcaagcaaggtttggacattcgt
cttagctgtcgtgtgaccggctcggaagttaaaggcaaaggtaagaaaaaagaagttacg
gtgacctttaccgataaagacggtaatgagcagcaagaaacctttgataagctgattgtt
tgtgtaggtcgcaagcccttcaccgaaggtctattgtctgaagacagtggcgtaaacttg
gatgagcgtggctttatttacgtcaacgatttatgttctaccgacgctcccggcgtctgg
gctgtcggggatgttgtgcgcggccccatgttggcgcacaaaggttctgaagagggtgtt
atggttgccgagcgtattgccggccaaaaacctttggtgaactacgacatcatccccaat
gtgatctacactcacccagaggttgcatccgtcggtaaaaccgaagagcagctaaaagcg
gaaggcgagccctacgaggtaggtaccttcccgttcttggctattggtcgcgcggttgcc
gctgatcagccagagggtatggttaaaatgattgcacacgctgagaccgatcgtattttg
ggttgccacatcgtgggcccaagcgcatcggatctaatccaagaagttgcaatcgcaatg
gaatttggcgccagtgctgaagatatcggaatgactgtgtttggtcacccgaccttctct
gaggccgtcaaagaagcagcattggcagtggcgggtcacgccatccacatgccaaatcgc
aagcgcaaaaaataa

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