Gilvimarinus japonicus: R50076_20740
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Entry
R50076_20740 CDS
T10758
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
gjp Gilvimarinus japonicus
Pathway
gjp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gjp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
R50076_20740 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gjp01007
]
R50076_20740 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gjp03016
]
R50076_20740 (serS)
Enzymes [BR:
gjp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
R50076_20740 (serS)
Amino acid related enzymes [BR:
gjp01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
R50076_20740 (serS)
Transfer RNA biogenesis [BR:
gjp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
R50076_20740 (serS)
Prokaryotic type
R50076_20740 (serS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
CCDC186_N
DUF2046
BAR_4
CC_Bre1
Astrin_C
Rootletin
BLOC1_2
Cep57_CLD
CDC37_N
YL1_C
Uds1
tRNA-synt_His
TMF_TATA_bd
KIF21A
FapA
Motif
Other DBs
NCBI-ProteinID:
BFM21025
LinkDB
All DBs
Position
complement(2448153..2449481)
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AA seq
442 aa
AA seq
DB search
MPPDIPQPNRKVIDMLDPKLIRSNLDDVAGALKKRGFSLDVSLLQRLEEERKAIQVKTEQ
LQSERNSRSKNIGKAKAAGDDITPLLKEVDQLKHDLSQAETELHEVQNKLDEYLSGVPNI
PADEVPEGLSEDDNVEVRRWGTPREFDFEVKDHVDLGADIDGLDFETASKITGSRFAVMR
GGVARMHRALVQLMLDMHVAEHGYQEVNVPYIVNAESLYGTGQLPKFADDLFKLDDEREF
YLIPTAEVPVTNLLRDTLLDKDAALPLKFVAHTPCFRSEAGSHGRDTRGMIRQHQFEKVE
LVQFVRPEDSDATLESLTGHAEAILQKLGLPYRTVILCGGDIGFSAAKTYDIEVWVPSQN
KYREISSCSSFRDFQARRLKARYRDPETGKPALLHTLNGSGLAIGRTLLAVLENYQQADG
SVLVPEALQGYMGGVTRIGAEG
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
gtgccccctgatattcctcaaccgaaccgaaaagtcattgatatgttagatcctaaactg
attcgctccaatctcgacgacgtagcgggcgcgcttaaaaagcgtggctttagcctagac
gttagccttttgcaacgcttagaagaagagcgcaaggctattcaggtaaaaactgagcaa
ctgcagtccgagcgtaacagtcgatccaaaaatatcggtaaggctaaagccgcaggtgac
gatattacgccgctgctcaaagaggttgaccagctaaagcacgacttgtctcaggcagaa
acagagctgcacgaagtgcaaaataagctggatgagtatttgtcgggcgtgcctaatatc
cccgccgatgaagtccccgaaggcttgagcgaagacgacaacgtcgaagtgcgccgctgg
ggtacaccgcgcgagtttgactttgaggtaaaagatcacgtcgatttaggcgcagatatc
gatggcctagactttgaaactgccagcaaaattaccggctcgcgatttgctgttatgcgt
ggcggtgtggcgcgtatgcaccgagcgttggtgcagctgatgctcgatatgcatgtggct
gagcacggctatcaagaggtcaatgtcccgtacattgtcaatgccgaatcgctctacggc
accggtcagctgcccaagtttgccgacgatctgtttaagctcgacgacgagcgcgagttt
tatttgattcccaccgccgaggtgccggtgaccaacctgctgcgcgatacgctgctggat
aaagacgcggcgctgccacttaagtttgtcgcccacaccccgtgctttcgctctgaggcg
ggcagccacggccgcgatactcgcggcatgattcgtcagcatcagtttgaaaaagtcgag
ctggtgcagtttgtgcgcccggaagactccgacgcaacgctggaaagcttaaccggtcac
gccgaagcgattttgcaaaaactcggtttgccatatcgcactgtgattttgtgtggtggc
gatatcggtttctcggcggctaagacttacgatattgaagtctgggtgccgtcgcaaaac
aaataccgcgagatttcctcgtgttctagttttcgcgatttccaggcgcgccgtctaaaa
gcgcgctaccgcgacccagaaaccggtaagcccgcgttgttgcataccttaaacggctcg
ggcttggctattggtcgcactctgttggcagtgctggaaaactaccagcaagccgatggc
agtgtattggtacctgaagcgctacaggggtatatgggtggtgtgacgcgcatcggcgcc
gagggctaa
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