Gilvimarinus japonicus: R50076_23400
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Entry
R50076_23400 CDS
T10758
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
gjp Gilvimarinus japonicus
Pathway
gjp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gjp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R50076_23400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gjp03019
]
R50076_23400
Enzymes [BR:
gjp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
R50076_23400
Messenger RNA biogenesis [BR:
gjp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
R50076_23400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
DUF2204
Motif
Other DBs
NCBI-ProteinID:
BFM21291
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All DBs
Position
2748885..2750222
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AA seq
445 aa
AA seq
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MLKRLFKLISPRSNTSTAKQPLVIPRDQHNVSRKLISHAAIKVMKQLGDHGYEAYLVGGG
VRDLLLGEQPKDFDVATNAKPEQIKGLFRSARIIGRRFKIVHVRFGREIIEVTTFRGHHE
AARSEHGMVLRDNVYGSVQSDAVRRDFTVNALYYSLDGFVVHDFTGGIHDLEKRTLRIIG
DPTTRYQEDPVRMLRAVRFAAKLGFNIAPETAAPISKLAGLLSNIPPARLFEEVLKLFLA
GSATATFHLLREYKLFGQLFPMVEAHLQTGDPIALEMIEQCMCNTDKRIRAGKSITPAFI
YAALLWPPQQALLGQLMGTMPKGQAFNDASQQVISAQLSRIAVPKRFLIPMREIWDMQHR
LTLRGGQRAYTMLEHPRFRAAYDFVLLREQAGEKLDGLGNWWTQFQAADDEGRAKLVSSV
KSGGPRKSRRRRNNNRKSSPSKQQD
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaaggctgtttaaactcatctccccccgctctaacaccagtaccgccaagcag
ccacttgtcatccctcgggatcaacacaatgtttcccgcaagctgatcagccacgcggct
atcaaggttatgaaacaactcggcgaccacggctacgaggcttacctagtcggtggcggg
gtgcgcgatctcttactcggggaacaacccaaagactttgacgttgccaccaacgccaag
cccgaacaaattaaagggctgtttcgcagtgcacgcattatcggccgccgctttaaaatc
gttcacgttcggtttggccgcgagatcattgaagtcaccacctttcgcggccaccacgaa
gccgcacgcagtgaacacggcatggtattgcgcgataacgtatacggctcggtacaatcc
gatgcggtacggcgcgactttacggtaaacgcgctctactactccctcgacggttttgtg
gtgcacgactttaccggcgggatccacgaccttgaaaaacgcaccttgcgtatcattggc
gaccccaccacccgctaccaagaagaccctgttcgcatgttaagggccgtgcgctttgcc
gccaaactgggctttaatattgcccccgagaccgccgctccgatcagcaaactggcgggg
ctgctcagtaacatcccacccgcccgcttgtttgaagaagtgctaaagctctttttggcc
ggctcggccaccgccacattccacctattgcgcgagtacaagctgtttggtcagctgttt
cccatggttgaggcgcacctgcaaaccggcgacccaattgcgctggagatgatcgagcag
tgcatgtgcaacaccgacaaacgtattcgcgcgggtaaatccattaccccggcctttatc
tacgccgccttgctttggcccccacagcaggcgctattggggcagcttatgggcactatg
cccaaagggcaggcctttaacgatgcctcgcaacaagttatcagcgcgcaactgtctcgt
atcgccgtccccaagcggtttctgatccccatgcgcgagatttgggacatgcaacaccgc
ctaactctgcgcggcggccagcgcgcttacacgatgcttgagcacccacggtttcgtgcc
gcttacgattttgtcctgctgcgcgagcaggcgggtgagaagctcgacggcctcggcaac
tggtggacacaatttcaagctgcggacgatgaaggccgtgccaagctggtcagcagtgta
aaatccggcggcccacgcaaatctcggcggcggcgcaataacaatcgtaaaagctccccc
tcgaaacagcaggattaa
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